Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KPNA2P2-201ENST00000419546 1489 ntBASIC3.21□□□□□ -1.9
RPL39P62891 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RPL39P62891 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
RPL39P62891 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.21□□□□□ -1.9
RPL39P62891 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPL39P62891 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL39P62891 NXPH1-205ENST00000602349 1953 ntBASIC3.2□□□□□ -1.9
RPL39P62891 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL39P62891 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL39P62891 RNU1-15P-201ENST00000353977 144 ntBASIC3.2□□□□□ -1.9
RPL39P62891 MIR513A2-201ENST00000385249 127 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AL591848.1-201ENST00000413092 322 ntBASIC3.2□□□□□ -1.9
RPL39P62891 CDY17P-201ENST00000414121 1282 ntBASIC3.2□□□□□ -1.9
RPL39P62891 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.2□□□□□ -1.9
RPL39P62891 RPL12P43-201ENST00000420608 499 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL39P62891 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 HLA-N-201ENST00000437516 135 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.2□□□□□ -1.9
RPL39P62891 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPL39P62891 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPL39P62891 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 AC090114.3-201ENST00000479267 829 ntBASIC3.2□□□□□ -1.9
RPL39P62891 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
RPL39P62891 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL39P62891 MTATP6P1-201ENST00000514057 681 ntBASIC3.2□□□□□ -1.9
RPL39P62891 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 RNA5SP360-201ENST00000516555 118 ntBASIC3.2□□□□□ -1.9
RPL39P62891 MYL12AP1-201ENST00000518490 515 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL39P62891 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.2□□□□□ -1.9
RPL39P62891 IFITM8P-201ENST00000522529 394 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AC092490.3-201ENST00000545370 572 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL39P62891 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.2□□□□□ -1.9
RPL39P62891 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 AC008638.3-201ENST00000603341 463 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AC010201.1-201ENST00000605051 540 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AP001521.2-201ENST00000608772 546 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AL357153.4-201ENST00000620487 1016 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL39P62891 NCLP2-201ENST00000416078 1462 ntBASIC3.2□□□□□ -1.9
RPL39P62891 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.2□□□□□ -1.9
RPL39P62891 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.2□□□□□ -1.9
RPL39P62891 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.2□□□□□ -1.9
RPL39P62891 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL39P62891 AC027290.2-201ENST00000623210 18662 ntBASIC3.2□□□□□ -1.9
RPL39P62891 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.2□□□□□ -1.9
RPL39P62891 AC135352.1-201ENST00000506173 1418 ntBASIC3.19□□□□□ -1.9
RPL39P62891 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL39P62891 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RPL39P62891 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL39P62891 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RPL39P62891 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RPL39P62891 AC107977.1-201ENST00000355745 939 ntBASIC3.19□□□□□ -1.9
RPL39P62891 RNA5SP242-201ENST00000364171 118 ntBASIC3.19□□□□□ -1.9
RPL39P62891 RHOT1P2-201ENST00000366423 333 ntBASIC3.19□□□□□ -1.9
RPL39P62891 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.19□□□□□ -1.9
RPL39P62891 AL078604.1-201ENST00000404609 466 ntBASIC3.19□□□□□ -1.9
RPL39P62891 OR3A2-201ENST00000408891 1076 ntBASIC3.19□□□□□ -1.9
RPL39P62891 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL39P62891 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC3.19□□□□□ -1.9
RPL39P62891 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL39P62891 NPM1P4-201ENST00000414095 812 ntBASIC3.19□□□□□ -1.9
RPL39P62891 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL39P62891 OR2B7P-201ENST00000429302 934 ntBASIC3.19□□□□□ -1.9
RPL39P62891 CDY14P-201ENST00000431260 1014 ntBASIC3.19□□□□□ -1.9
RPL39P62891 RPS29P14-201ENST00000431518 171 ntBASIC3.19□□□□□ -1.9
RPL39P62891 CDY12P-201ENST00000440679 1015 ntBASIC3.19□□□□□ -1.9
RPL39P62891 CDY13P-201ENST00000445813 1015 ntBASIC3.19□□□□□ -1.9
RPL39P62891 CDY23P-201ENST00000451661 1014 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AURKAPS1-201ENST00000451805 1212 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL39P62891 ISCUP1-201ENST00000454451 448 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AK6-203ENST00000502819 743 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL39P62891 SNRPCP2-201ENST00000504370 475 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL39P62891 AC004980.4-201ENST00000513375 203 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AC015795.1-201ENST00000513669 327 ntBASIC3.19□□□□□ -1.9
RPL39P62891 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.19□□□□□ -1.9
RPL39P62891 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL39P62891 CYP4A43P-201ENST00000568156 121 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL39P62891 AC090181.2-201ENST00000602975 672 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AC023762.1-201ENST00000603280 584 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AL512329.2-201ENST00000607350 548 ntBASIC3.19□□□□□ -1.9
RPL39P62891 AC008115.4-201ENST00000619780 775 ntBASIC3.19□□□□□ -1.9
RPL39P62891 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL39P62891 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPL39P62891 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.19□□□□□ -1.9
RPL39P62891 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms