Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC000111.2-201ENST00000448200 210 ntBASIC4.66□□□□□ -1.66
VSX2P58304 OR1H1P-201ENST00000448731 937 ntBASIC4.66□□□□□ -1.66
VSX2P58304 AL356390.1-201ENST00000455684 397 ntBASIC4.66□□□□□ -1.66
VSX2P58304 OR2A3P-201ENST00000493774 953 ntBASIC4.66□□□□□ -1.66
VSX2P58304 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VSX2P58304 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.66□□□□□ -1.66
VSX2P58304 OR7H2P-201ENST00000513483 306 ntBASIC4.66□□□□□ -1.66
VSX2P58304 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.66□□□□□ -1.66
VSX2P58304 RNA5SP392-201ENST00000516905 112 ntBASIC4.66□□□□□ -1.66
VSX2P58304 AC105031.1-201ENST00000518550 476 ntBASIC4.66□□□□□ -1.66
VSX2P58304 AL390726.5-202ENST00000564800 256 ntBASIC4.66□□□□□ -1.66
VSX2P58304 AC010547.7-201ENST00000570323 333 ntBASIC4.66□□□□□ -1.66
VSX2P58304 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.66□□□□□ -1.66
VSX2P58304 MIR3667-201ENST00000581025 74 ntBASIC4.66□□□□□ -1.66
VSX2P58304 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.66□□□□□ -1.66
VSX2P58304 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.66□□□□□ -1.66
VSX2P58304 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VSX2P58304 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.66□□□□□ -1.66
VSX2P58304 AL022401.1-201ENST00000619498 108 ntBASIC4.66□□□□□ -1.66
VSX2P58304 AC073342.3-201ENST00000624211 193 ntBASIC4.66□□□□□ -1.66
VSX2P58304 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.66□□□□□ -1.66
VSX2P58304 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.66□□□□□ -1.66
VSX2P58304 AC097461.1-201ENST00000568928 2821 ntBASIC4.66□□□□□ -1.66
VSX2P58304 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VSX2P58304 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VSX2P58304 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VSX2P58304 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.66□□□□□ -1.66
VSX2P58304 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.66□□□□□ -1.66
VSX2P58304 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VSX2P58304 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VSX2P58304 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
VSX2P58304 AC008758.3-201ENST00000507003 1829 ntBASIC4.65□□□□□ -1.66
VSX2P58304 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.65□□□□□ -1.66
VSX2P58304 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.65□□□□□ -1.66
VSX2P58304 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VSX2P58304 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VSX2P58304 AC017079.1-201ENST00000333650 415 ntBASIC4.65□□□□□ -1.67
VSX2P58304 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VSX2P58304 RNA5SP443-201ENST00000363083 132 ntBASIC4.65□□□□□ -1.67
VSX2P58304 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VSX2P58304 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VSX2P58304 RPL10P10-201ENST00000403509 664 ntBASIC4.65□□□□□ -1.67
VSX2P58304 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.65□□□□□ -1.67
VSX2P58304 MIR1271-201ENST00000408537 86 ntBASIC4.65□□□□□ -1.67
VSX2P58304 RN7SKP247-201ENST00000411094 308 ntBASIC4.65□□□□□ -1.67
VSX2P58304 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 AC104333.2-201ENST00000422630 192 ntBASIC4.65□□□□□ -1.67
VSX2P58304 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.65□□□□□ -1.67
VSX2P58304 AC007559.1-201ENST00000428736 355 ntBASIC4.65□□□□□ -1.67
VSX2P58304 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.65□□□□□ -1.67
VSX2P58304 AL589765.3-201ENST00000446084 462 ntBASIC4.65□□□□□ -1.67
VSX2P58304 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.65□□□□□ -1.67
VSX2P58304 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.65□□□□□ -1.67
VSX2P58304 RN7SL346P-201ENST00000491561 294 ntBASIC4.65□□□□□ -1.67
VSX2P58304 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 AL049839.1-201ENST00000556151 657 ntBASIC4.65□□□□□ -1.67
VSX2P58304 AGGF1P9-201ENST00000561884 913 ntBASIC4.65□□□□□ -1.67
VSX2P58304 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.65□□□□□ -1.67
VSX2P58304 AP000919.1-201ENST00000582850 985 ntBASIC4.65□□□□□ -1.67
VSX2P58304 RN7SL435P-201ENST00000584418 282 ntBASIC4.65□□□□□ -1.67
VSX2P58304 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VSX2P58304 AC010424.2-201ENST00000607594 443 ntBASIC4.65□□□□□ -1.67
VSX2P58304 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.65□□□□□ -1.67
VSX2P58304 BX005214.3-202ENST00000619809 325 ntBASIC4.65□□□□□ -1.67
VSX2P58304 AC015871.5-202ENST00000623252 701 ntBASIC4.65□□□□□ -1.67
VSX2P58304 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 AC073869.10-201ENST00000642016 354 ntBASIC4.65□□□□□ -1.67
VSX2P58304 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VSX2P58304 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VSX2P58304 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VSX2P58304 LINC01355-201ENST00000566551 5444 ntBASIC4.65□□□□□ -1.67
VSX2P58304 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
VSX2P58304 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.65□□□□□ -1.67
VSX2P58304 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.65□□□□□ -1.67
VSX2P58304 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VSX2P58304 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.64□□□□□ -1.67
VSX2P58304 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VSX2P58304 AC027228.2-201ENST00000567141 2154 ntBASIC4.64□□□□□ -1.67
VSX2P58304 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
VSX2P58304 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VSX2P58304 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VSX2P58304 AL359643.1-201ENST00000404109 423 ntBASIC4.64□□□□□ -1.67
VSX2P58304 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.64□□□□□ -1.67
VSX2P58304 OR2AH1P-201ENST00000425717 928 ntBASIC4.64□□□□□ -1.67
VSX2P58304 OR2B7P-201ENST00000429302 934 ntBASIC4.64□□□□□ -1.67
VSX2P58304 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms