Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.4□□□□□ -1.54
RAD23BP54727 PTP4A1P3-201ENST00000433661 420 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AL627308.1-201ENST00000435693 821 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAD23BP54727 RNF2P1-201ENST00000442955 1010 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.4□□□□□ -1.54
RAD23BP54727 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.4□□□□□ -1.54
RAD23BP54727 AC092902.1-201ENST00000486999 259 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.4□□□□□ -1.54
RAD23BP54727 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.4□□□□□ -1.54
RAD23BP54727 AC010350.1-201ENST00000504908 231 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AC008638.1-201ENST00000506035 866 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD23BP54727 AC010374.2-201ENST00000512933 535 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 HMGN1P15-201ENST00000513870 295 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD23BP54727 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD23BP54727 OSBPL9P3-201ENST00000534523 595 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD23BP54727 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.4□□□□□ -1.54
RAD23BP54727 AL121839.1-201ENST00000556233 1185 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD23BP54727 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.4□□□□□ -1.54
RAD23BP54727 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
RAD23BP54727 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.4□□□□□ -1.54
RAD23BP54727 AC015911.5-201ENST00000587076 451 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AC018695.5-201ENST00000605872 315 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD23BP54727 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.4□□□□□ -1.54
RAD23BP54727 MIR6719-201ENST00000622428 87 ntBASIC5.4□□□□□ -1.54
RAD23BP54727 AC011447.7-201ENST00000624228 1590 ntBASIC5.4□□□□□ -1.55
RAD23BP54727 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RAD23BP54727 ZNF652P1-201ENST00000442420 1309 ntBASIC5.4□□□□□ -1.55
RAD23BP54727 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.4□□□□□ -1.55
RAD23BP54727 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAD23BP54727 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAD23BP54727 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.4□□□□□ -1.55
RAD23BP54727 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RAD23BP54727 DDX18P6-201ENST00000450119 1997 ntBASIC5.4□□□□□ -1.55
RAD23BP54727 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
RAD23BP54727 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAD23BP54727 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD23BP54727 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.39□□□□□ -1.55
RAD23BP54727 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RAD23BP54727 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD23BP54727 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD23BP54727 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.39□□□□□ -1.55
RAD23BP54727 AC019072.1-201ENST00000604535 1551 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAD23BP54727 AL672167.1-204ENST00000641875 3017 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD23BP54727 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD23BP54727 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.39□□□□□ -1.55
RAD23BP54727 SPTLC1P2-201ENST00000407089 121 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 SNORA77-201ENST00000408716 125 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.39□□□□□ -1.55
RAD23BP54727 PCNPP4-201ENST00000414817 517 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 GLUD1P9-201ENST00000420997 1173 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.39□□□□□ -1.55
RAD23BP54727 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.39□□□□□ -1.55
RAD23BP54727 AL513321.1-201ENST00000441175 761 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 XKRY2-201ENST00000442362 1093 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 IGHV5-78-201ENST00000450948 295 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.39□□□□□ -1.55
RAD23BP54727 AC091180.1-201ENST00000462104 372 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 AC026348.1-201ENST00000462549 1053 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.39□□□□□ -1.55
RAD23BP54727 RPSAP50-201ENST00000481955 852 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 RN7SL441P-201ENST00000492388 296 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 AC004980.4-201ENST00000513375 203 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 RN7SKP260-201ENST00000516907 149 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 VTA1P2-201ENST00000520205 911 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.39□□□□□ -1.55
RAD23BP54727 AL512310.9-201ENST00000553311 948 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAD23BP54727 AC027176.2-201ENST00000559166 746 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 AC093510.2-201ENST00000562820 896 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.39□□□□□ -1.55
RAD23BP54727 AL445222.1-201ENST00000607259 628 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 AC009163.6-201ENST00000612367 342 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.39□□□□□ -1.55
RAD23BP54727 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD23BP54727 AC018445.2-201ENST00000622987 260 ntBASIC5.39□□□□□ -1.55
RAD23BP54727 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.39□□□□□ -1.55
RAD23BP54727 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
RAD23BP54727 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.39□□□□□ -1.55
RAD23BP54727 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.39□□□□□ -1.55
RAD23BP54727 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
RAD23BP54727 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAD23BP54727 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RAD23BP54727 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAD23BP54727 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.38□□□□□ -1.55
RAD23BP54727 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAD23BP54727 AL022393.1-201ENST00000625142 1677 ntBASIC5.38□□□□□ -1.55
RAD23BP54727 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RAD23BP54727 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.38□□□□□ -1.55
RAD23BP54727 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.38□□□□□ -1.55
RAD23BP54727 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAD23BP54727 MTHFD2P5-201ENST00000320415 844 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms