Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PDX1P52945 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.98□□□□□ -1.61
PDX1P52945 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 AP000542.2-201ENST00000623199 6179 ntBASIC4.98□□□□□ -1.61
PDX1P52945 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 SNORD115-48-201ENST00000364764 76 ntBASIC4.98□□□□□ -1.61
PDX1P52945 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PDX1P52945 RPL10P10-201ENST00000403509 664 ntBASIC4.98□□□□□ -1.61
PDX1P52945 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 CHEK2P3-201ENST00000416118 248 ntBASIC4.98□□□□□ -1.61
PDX1P52945 HYALP1-201ENST00000417674 1279 ntBASIC4.98□□□□□ -1.61
PDX1P52945 MORF4L1P7-201ENST00000426038 703 ntBASIC4.98□□□□□ -1.61
PDX1P52945 RPL19P16-201ENST00000433839 588 ntBASIC4.98□□□□□ -1.61
PDX1P52945 AC245517.2-201ENST00000442890 346 ntBASIC4.98□□□□□ -1.61
PDX1P52945 AC011753.3-201ENST00000443436 406 ntBASIC4.98□□□□□ -1.61
PDX1P52945 AC016772.1-201ENST00000444170 1261 ntBASIC4.98□□□□□ -1.61
PDX1P52945 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.98□□□□□ -1.61
PDX1P52945 MTND2P39-201ENST00000457230 764 ntBASIC4.98□□□□□ -1.61
PDX1P52945 CEACAMP10-202ENST00000495431 496 ntBASIC4.98□□□□□ -1.61
PDX1P52945 SUMO2P4-201ENST00000504193 276 ntBASIC4.98□□□□□ -1.61
PDX1P52945 BTF3P13-201ENST00000513224 490 ntBASIC4.98□□□□□ -1.61
PDX1P52945 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.98□□□□□ -1.61
PDX1P52945 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.98□□□□□ -1.61
PDX1P52945 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.98□□□□□ -1.61
PDX1P52945 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.98□□□□□ -1.61
PDX1P52945 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.98□□□□□ -1.61
PDX1P52945 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 AC011487.3-201ENST00000593607 453 ntBASIC4.98□□□□□ -1.61
PDX1P52945 AL031320.1-201ENST00000604177 357 ntBASIC4.98□□□□□ -1.61
PDX1P52945 AP003400.3-201ENST00000624904 346 ntBASIC4.98□□□□□ -1.61
PDX1P52945 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 AC007996.1-201ENST00000620414 2821 ntBASIC4.98□□□□□ -1.61
PDX1P52945 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PDX1P52945 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
PDX1P52945 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDX1P52945 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
PDX1P52945 AC079298.1-201ENST00000625026 1619 ntBASIC4.97□□□□□ -1.61
PDX1P52945 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDX1P52945 OR9K1P-202ENST00000641111 3217 ntBASIC4.97□□□□□ -1.61
PDX1P52945 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDX1P52945 AC112198.2-201ENST00000426589 6996 ntBASIC4.97□□□□□ -1.61
PDX1P52945 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDX1P52945 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.97□□□□□ -1.61
PDX1P52945 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.97□□□□□ -1.61
PDX1P52945 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDX1P52945 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PDX1P52945 RNA5SP90-201ENST00000364801 99 ntBASIC4.97□□□□□ -1.61
PDX1P52945 RNA5SP428-201ENST00000365129 132 ntBASIC4.97□□□□□ -1.61
PDX1P52945 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.97□□□□□ -1.61
PDX1P52945 OR1L6-202ENST00000373684 1044 ntBASIC4.97□□□□□ -1.61
PDX1P52945 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDX1P52945 MIR192-201ENST00000384915 110 ntBASIC4.97□□□□□ -1.61
PDX1P52945 Z86062.1-201ENST00000406773 777 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AL353692.2-201ENST00000407054 335 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC016397.1-201ENST00000412463 242 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC245028.1-201ENST00000423259 256 ntBASIC4.97□□□□□ -1.61
PDX1P52945 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.97□□□□□ -1.61
PDX1P52945 ZNF965P-201ENST00000432501 817 ntBASIC4.97□□□□□ -1.61
PDX1P52945 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC007000.2-201ENST00000442564 487 ntBASIC4.97□□□□□ -1.61
PDX1P52945 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.97□□□□□ -1.61
PDX1P52945 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.97□□□□□ -1.61
PDX1P52945 CABYRP1-201ENST00000465493 1045 ntBASIC4.97□□□□□ -1.61
PDX1P52945 RN7SL346P-201ENST00000491561 294 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC008897.1-201ENST00000494006 347 ntBASIC4.97□□□□□ -1.61
PDX1P52945 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.97□□□□□ -1.61
PDX1P52945 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.97□□□□□ -1.61
PDX1P52945 MTND3P3-201ENST00000505004 126 ntBASIC4.97□□□□□ -1.61
PDX1P52945 IMPA1P1-201ENST00000510718 842 ntBASIC4.97□□□□□ -1.61
PDX1P52945 ASNSP4-201ENST00000511103 447 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.97□□□□□ -1.61
PDX1P52945 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.97□□□□□ -1.61
PDX1P52945 NOP56P3-201ENST00000549457 385 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.97□□□□□ -1.61
PDX1P52945 EDDM3DP-201ENST00000554692 434 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.97□□□□□ -1.61
PDX1P52945 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PDX1P52945 MIR4737-201ENST00000583979 81 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms