Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC006210.2-201ENST00000367074 1545 ntBASIC4.57□□□□□ -1.68
RFC3P40938 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC3P40938 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFC3P40938 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFC3P40938 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC3P40938 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC3P40938 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC3P40938 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.57□□□□□ -1.68
RFC3P40938 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RFC3P40938 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFC3P40938 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RFC3P40938 RNA5SP191-201ENST00000362585 102 ntBASIC4.57□□□□□ -1.68
RFC3P40938 RNU6-729P-201ENST00000384399 107 ntBASIC4.57□□□□□ -1.68
RFC3P40938 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RFC3P40938 AL035079.1-201ENST00000405210 287 ntBASIC4.57□□□□□ -1.68
RFC3P40938 SNORA77-201ENST00000408716 125 ntBASIC4.57□□□□□ -1.68
RFC3P40938 SEPT7P8-201ENST00000413308 775 ntBASIC4.57□□□□□ -1.68
RFC3P40938 FABP7P2-201ENST00000429946 379 ntBASIC4.57□□□□□ -1.68
RFC3P40938 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 AC016772.1-201ENST00000444170 1261 ntBASIC4.57□□□□□ -1.68
RFC3P40938 AL354714.3-201ENST00000447284 493 ntBASIC4.57□□□□□ -1.68
RFC3P40938 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC3P40938 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 RBMY2TP-201ENST00000451162 947 ntBASIC4.57□□□□□ -1.68
RFC3P40938 AC008897.1-201ENST00000494006 347 ntBASIC4.57□□□□□ -1.68
RFC3P40938 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC3P40938 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.57□□□□□ -1.68
RFC3P40938 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC3P40938 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 MORF4L1P3-201ENST00000525966 950 ntBASIC4.57□□□□□ -1.68
RFC3P40938 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC3P40938 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 CR383656.6-201ENST00000550518 394 ntBASIC4.57□□□□□ -1.68
RFC3P40938 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC3P40938 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC3P40938 AC233280.2-201ENST00000603917 1070 ntBASIC4.57□□□□□ -1.68
RFC3P40938 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC3P40938 AC073575.2-201ENST00000614212 627 ntBASIC4.57□□□□□ -1.68
RFC3P40938 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.57□□□□□ -1.68
RFC3P40938 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFC3P40938 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFC3P40938 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFC3P40938 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC3P40938 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC3P40938 SAMMSON-226ENST00000642089 1582 ntBASIC4.57□□□□□ -1.68
RFC3P40938 OR51H2P-202ENST00000641424 3046 ntBASIC4.56□□□□□ -1.68
RFC3P40938 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
RFC3P40938 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RFC3P40938 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.56□□□□□ -1.68
RFC3P40938 AC022417.1-201ENST00000624768 1303 ntBASIC4.56□□□□□ -1.68
RFC3P40938 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 Z97832.1-201ENST00000402490 328 ntBASIC4.56□□□□□ -1.68
RFC3P40938 AC233289.1-201ENST00000403700 508 ntBASIC4.56□□□□□ -1.68
RFC3P40938 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.56□□□□□ -1.68
RFC3P40938 HSPD1P12-201ENST00000429127 1069 ntBASIC4.56□□□□□ -1.68
RFC3P40938 TMX2P1-201ENST00000436507 708 ntBASIC4.56□□□□□ -1.68
RFC3P40938 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC3P40938 RPL7P11-201ENST00000437586 658 ntBASIC4.56□□□□□ -1.68
RFC3P40938 AL138787.1-202ENST00000437804 898 ntBASIC4.56□□□□□ -1.68
RFC3P40938 OR7E125P-201ENST00000443450 846 ntBASIC4.56□□□□□ -1.68
RFC3P40938 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC3P40938 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC3P40938 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC3P40938 AC022882.1-201ENST00000532142 501 ntBASIC4.56□□□□□ -1.68
RFC3P40938 AP001804.2-201ENST00000533932 910 ntBASIC4.56□□□□□ -1.68
RFC3P40938 BNIP3P1-201ENST00000547295 580 ntBASIC4.56□□□□□ -1.68
RFC3P40938 PRPF19P1-201ENST00000584766 898 ntBASIC4.56□□□□□ -1.68
RFC3P40938 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.56□□□□□ -1.68
RFC3P40938 AC005377.1-201ENST00000605126 456 ntBASIC4.56□□□□□ -1.68
RFC3P40938 AC239803.2-201ENST00000610161 430 ntBASIC4.56□□□□□ -1.68
RFC3P40938 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.56□□□□□ -1.68
RFC3P40938 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.56□□□□□ -1.68
RFC3P40938 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RFC3P40938 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.56□□□□□ -1.68
RFC3P40938 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC3P40938 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RFC3P40938 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC3P40938 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC3P40938 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC3P40938 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.55□□□□□ -1.68
RFC3P40938 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC3P40938 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC3P40938 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC3P40938 AC099654.2-201ENST00000433031 1980 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms