Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC073073.1-201ENST00000493920 463 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.77□□□□□ -1.65
SHMT2P34897 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.77□□□□□ -1.65
SHMT2P34897 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.77□□□□□ -1.65
SHMT2P34897 MRPS33P2-201ENST00000507850 322 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 BTF3P13-201ENST00000513224 490 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 RFPL4AP5-201ENST00000514977 504 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.77□□□□□ -1.65
SHMT2P34897 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.77□□□□□ -1.65
SHMT2P34897 BRD9P1-201ENST00000529855 560 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 AC005868.1-201ENST00000536421 331 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 BGLT3-201ENST00000564523 994 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 DPRXP4-201ENST00000578053 568 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.77□□□□□ -1.65
SHMT2P34897 AC087385.3-201ENST00000620477 187 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
SHMT2P34897 AC243960.7-201ENST00000623532 707 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 CR381572.2-201ENST00000624852 397 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.77□□□□□ -1.65
SHMT2P34897 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.77□□□□□ -1.65
SHMT2P34897 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHMT2P34897 AC068446.1-201ENST00000556425 1549 ntBASIC4.77□□□□□ -1.65
SHMT2P34897 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHMT2P34897 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHMT2P34897 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.76□□□□□ -1.65
SHMT2P34897 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.76□□□□□ -1.65
SHMT2P34897 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHMT2P34897 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 AL590762.4-201ENST00000425885 253 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.76□□□□□ -1.65
SHMT2P34897 AC092162.1-201ENST00000432828 434 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 SCAND3P1-201ENST00000439854 1060 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 AC073052.1-201ENST00000440417 714 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 RN7SL517P-201ENST00000462240 305 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 AC112206.1-201ENST00000468416 477 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHMT2P34897 IRF5P1-201ENST00000504852 2164 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.76□□□□□ -1.65
SHMT2P34897 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHMT2P34897 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 AC009117.1-201ENST00000563948 554 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 AC233702.9-201ENST00000581528 203 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.76□□□□□ -1.65
SHMT2P34897 AC020910.3-201ENST00000603701 874 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 AL672167.1-205ENST00000641112 3080 ntBASIC4.76□□□□□ -1.65
SHMT2P34897 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHMT2P34897 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SHMT2P34897 AC083843.3-201ENST00000623679 2186 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.75□□□□□ -1.65
SHMT2P34897 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.75□□□□□ -1.65
SHMT2P34897 CUL4AP1-201ENST00000514750 1863 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHMT2P34897 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHMT2P34897 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SHMT2P34897 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHMT2P34897 AC007068.1-201ENST00000396690 844 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.75□□□□□ -1.65
SHMT2P34897 AC016769.2-201ENST00000414815 475 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 TBCAP2-201ENST00000416175 326 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 QRSL1P2-201ENST00000418582 964 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 EIF4A1P1-201ENST00000420241 934 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.75□□□□□ -1.65
SHMT2P34897 AC104837.2-201ENST00000427236 424 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.75□□□□□ -1.65
SHMT2P34897 AC007559.1-201ENST00000428736 355 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.75□□□□□ -1.65
SHMT2P34897 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.75□□□□□ -1.65
SHMT2P34897 AL772161.1-201ENST00000439130 476 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.75□□□□□ -1.65
SHMT2P34897 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHMT2P34897 OR52J1P-201ENST00000450596 932 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 RPS3AP53-201ENST00000454716 778 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 RN7SL591P-201ENST00000496150 292 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.75□□□□□ -1.65
SHMT2P34897 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.75□□□□□ -1.65
SHMT2P34897 AC113398.2-201ENST00000507630 558 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 RNA5SP249-201ENST00000516127 99 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.75□□□□□ -1.65
SHMT2P34897 GCSHP4-201ENST00000538792 439 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SHMT2P34897 AP000919.1-201ENST00000582850 985 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.75□□□□□ -1.65
SHMT2P34897 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.75□□□□□ -1.65
SHMT2P34897 AC024940.4-201ENST00000605507 246 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 AC006840.1-201ENST00000623069 542 ntBASIC4.75□□□□□ -1.65
SHMT2P34897 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHMT2P34897 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.75□□□□□ -1.65
SHMT2P34897 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.75□□□□□ -1.65
SHMT2P34897 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.75□□□□□ -1.65
SHMT2P34897 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SHMT2P34897 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHMT2P34897 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms