Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 OR10G5P-201ENST00000532733 358 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AC134349.2-201ENST00000535136 910 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.81□□□□□ -1.64
PTPN6P29350 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 MIR3936-201ENST00000584304 110 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN6P29350 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.81□□□□□ -1.64
PTPN6P29350 AC079791.1-201ENST00000605356 973 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 AC016769.4-201ENST00000616893 535 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 AC092159.4-201ENST00000624944 550 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 AC135068.12-201ENST00000637370 931 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN6P29350 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 ZNF733P-202ENST00000444809 1573 ntBASIC4.81□□□□□ -1.64
PTPN6P29350 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PTPN6P29350 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PTPN6P29350 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN6P29350 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN6P29350 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN6P29350 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN6P29350 AC109780.1-201ENST00000451768 1344 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN6P29350 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 SPTLC1P2-201ENST00000407089 121 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AL590609.2-201ENST00000421430 368 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.8□□□□□ -1.64
PTPN6P29350 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN6P29350 AC093716.1-201ENST00000435923 377 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN6P29350 AL450263.2-201ENST00000439400 589 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AL450023.3-201ENST00000440592 271 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 RSL24D1P2-201ENST00000445584 366 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN6P29350 CLIC4P1-201ENST00000453177 535 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN6P29350 AC008410.1-201ENST00000483777 339 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN6P29350 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN6P29350 HMGB3P16-201ENST00000508037 287 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN6P29350 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.8□□□□□ -1.64
PTPN6P29350 OR4A46P-201ENST00000527255 933 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 OR8A2P-201ENST00000528631 952 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN6P29350 AC022832.1-201ENST00000530718 645 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 NPM1P35-201ENST00000533043 868 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AC107918.3-201ENST00000533272 382 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AC024940.3-201ENST00000538551 316 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN6P29350 NDUFB4P11-201ENST00000560510 395 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AC044860.2-201ENST00000561005 179 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN6P29350 AC095055.1-201ENST00000603472 1113 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN6P29350 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN6P29350 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTPN6P29350 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PTPN6P29350 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PTPN6P29350 AC093535.2-201ENST00000624769 2326 ntBASIC4.8□□□□□ -1.64
PTPN6P29350 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN6P29350 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN6P29350 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN6P29350 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN6P29350 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN6P29350 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PTPN6P29350 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN6P29350 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN6P29350 SNORA17.1-201ENST00000362945 126 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN6P29350 RNU6-225P-201ENST00000384613 103 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms