Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.36□□□□□ -1.55
EPHA3P29320 AC111152.1-202ENST00000635848 339 ntBASIC5.36□□□□□ -1.55
EPHA3P29320 AC111188.2-201ENST00000529697 1387 ntBASIC5.36□□□□□ -1.55
EPHA3P29320 AC093225.1-201ENST00000506867 1408 ntBASIC5.36□□□□□ -1.55
EPHA3P29320 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHA3P29320 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHA3P29320 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHA3P29320 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
EPHA3P29320 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHA3P29320 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
EPHA3P29320 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
EPHA3P29320 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHA3P29320 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHA3P29320 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHA3P29320 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.36□□□□□ -1.55
EPHA3P29320 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EPHA3P29320 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
EPHA3P29320 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 AC011755.1-201ENST00000623763 2049 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHA3P29320 AC073055.1-201ENST00000456901 1621 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
EPHA3P29320 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
EPHA3P29320 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
EPHA3P29320 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 RNU6-353P-201ENST00000364266 108 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 RNU6-185P-201ENST00000384421 107 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
EPHA3P29320 AL035419.1-201ENST00000397037 564 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.35□□□□□ -1.55
EPHA3P29320 AL356320.2-201ENST00000417263 507 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AC007161.1-204ENST00000423039 460 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 RPL7AP49-201ENST00000429522 581 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 YWHAEP5-201ENST00000431545 765 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AL591438.1-201ENST00000433508 581 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 AL353093.1-201ENST00000441292 436 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 MTCYBP42-201ENST00000444653 1130 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHA3P29320 AC090804.1-201ENST00000448870 490 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 OR52E3P-201ENST00000452083 936 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 USP9YP25-201ENST00000457708 443 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.35□□□□□ -1.55
EPHA3P29320 AC091874.2-201ENST00000505889 720 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 HMGN1P9-201ENST00000515212 298 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.35□□□□□ -1.55
EPHA3P29320 DEFB130C-202ENST00000530001 230 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 AC007834.2-201ENST00000536310 343 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
EPHA3P29320 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 MTCYBP27-201ENST00000555160 670 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 NMNAT1P5-201ENST00000559657 841 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AC009094.1-201ENST00000564443 426 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 AL353778.1-201ENST00000603149 408 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.35□□□□□ -1.55
EPHA3P29320 AC011472.4-201ENST00000615848 491 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 AC017037.3-201ENST00000625016 472 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
EPHA3P29320 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EPHA3P29320 THAP12P5-201ENST00000405864 2275 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 LINC02019-201ENST00000608605 2060 ntBASIC5.35□□□□□ -1.55
EPHA3P29320 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
EPHA3P29320 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
EPHA3P29320 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
EPHA3P29320 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
EPHA3P29320 CCT8P1-201ENST00000413611 1657 ntBASIC5.34□□□□□ -1.55
EPHA3P29320 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.55
EPHA3P29320 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
EPHA3P29320 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
EPHA3P29320 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
EPHA3P29320 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms