Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC109780.1-201ENST00000451768 1344 ntBASIC5.69□□□□□ -1.5
BDNFP23560 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.69□□□□□ -1.5
BDNFP23560 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BDNFP23560 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.68□□□□□ -1.5
BDNFP23560 AC079097.1-201ENST00000512187 1399 ntBASIC5.68□□□□□ -1.5
BDNFP23560 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.68□□□□□ -1.5
BDNFP23560 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.68□□□□□ -1.5
BDNFP23560 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BDNFP23560 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.68□□□□□ -1.5
BDNFP23560 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
BDNFP23560 AC006206.1-201ENST00000544842 3387 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AL133268.1-201ENST00000405676 1401 ntBASIC5.68□□□□□ -1.5
BDNFP23560 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BDNFP23560 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BDNFP23560 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BDNFP23560 AC092681.1-201ENST00000297369 291 ntBASIC5.68□□□□□ -1.5
BDNFP23560 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BDNFP23560 RNA5SP487-201ENST00000410186 122 ntBASIC5.68□□□□□ -1.5
BDNFP23560 RNU4-34P-201ENST00000410431 124 ntBASIC5.68□□□□□ -1.5
BDNFP23560 LINC01347-201ENST00000417964 355 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.68□□□□□ -1.5
BDNFP23560 AL627308.1-201ENST00000435693 821 ntBASIC5.68□□□□□ -1.5
BDNFP23560 GEMIN8P3-201ENST00000445417 720 ntBASIC5.68□□□□□ -1.5
BDNFP23560 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.68□□□□□ -1.5
BDNFP23560 FAR2P1-206ENST00000449736 709 ntBASIC5.68□□□□□ -1.5
BDNFP23560 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.68□□□□□ -1.5
BDNFP23560 AC005532.2-201ENST00000467154 373 ntBASIC5.68□□□□□ -1.5
BDNFP23560 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.68□□□□□ -1.5
BDNFP23560 RN7SL591P-201ENST00000496150 292 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.68□□□□□ -1.5
BDNFP23560 GLUD1P3-202ENST00000508551 200 ntBASIC5.68□□□□□ -1.5
BDNFP23560 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.68□□□□□ -1.5
BDNFP23560 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.68□□□□□ -1.5
BDNFP23560 OR10G5P-201ENST00000532733 358 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.68□□□□□ -1.5
BDNFP23560 MTND4LP24-201ENST00000572277 291 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AC115085.1-201ENST00000588924 229 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.68□□□□□ -1.5
BDNFP23560 AC126915.2-201ENST00000610957 190 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AC016769.4-201ENST00000616893 535 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.68□□□□□ -1.5
BDNFP23560 AC011815.3-201ENST00000624194 473 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AP003072.4-201ENST00000624580 310 ntBASIC5.68□□□□□ -1.5
BDNFP23560 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.68□□□□□ -1.5
BDNFP23560 CFTRP2-201ENST00000634304 199 ntBASIC5.68□□□□□ -1.5
BDNFP23560 AC134882.1-201ENST00000603738 1676 ntBASIC5.68□□□□□ -1.5
BDNFP23560 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.68□□□□□ -1.5
BDNFP23560 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.68□□□□□ -1.5
BDNFP23560 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.68□□□□□ -1.5
BDNFP23560 AL353743.4-201ENST00000422653 1547 ntBASIC5.68□□□□□ -1.5
BDNFP23560 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BDNFP23560 SAGE2P-201ENST00000420011 2126 ntBASIC5.68□□□□□ -1.5
BDNFP23560 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
BDNFP23560 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BDNFP23560 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BDNFP23560 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 AC114774.1-201ENST00000507410 1770 ntBASIC5.67□□□□□ -1.5
BDNFP23560 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.67□□□□□ -1.5
BDNFP23560 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BDNFP23560 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.67□□□□□ -1.5
BDNFP23560 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BDNFP23560 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.67□□□□□ -1.5
BDNFP23560 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BDNFP23560 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BDNFP23560 RNU1-43P-201ENST00000365052 165 ntBASIC5.67□□□□□ -1.5
BDNFP23560 OR52E6-202ENST00000379946 954 ntBASIC5.67□□□□□ -1.5
BDNFP23560 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BDNFP23560 DBIP1-201ENST00000401435 260 ntBASIC5.67□□□□□ -1.5
BDNFP23560 UBE2V1P15-201ENST00000407776 448 ntBASIC5.67□□□□□ -1.5
BDNFP23560 AC010385.1-201ENST00000412374 256 ntBASIC5.67□□□□□ -1.5
BDNFP23560 AL138785.1-201ENST00000425821 331 ntBASIC5.67□□□□□ -1.5
BDNFP23560 VTI1BP4-201ENST00000427516 527 ntBASIC5.67□□□□□ -1.5
BDNFP23560 RPL7P29-201ENST00000437151 728 ntBASIC5.67□□□□□ -1.5
BDNFP23560 BTBD7P2-201ENST00000441962 620 ntBASIC5.67□□□□□ -1.5
BDNFP23560 RPS11P7-201ENST00000442125 465 ntBASIC5.67□□□□□ -1.5
BDNFP23560 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.67□□□□□ -1.5
BDNFP23560 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.67□□□□□ -1.5
BDNFP23560 RN7SL222P-201ENST00000476452 299 ntBASIC5.67□□□□□ -1.5
BDNFP23560 NPM1P17-201ENST00000479221 602 ntBASIC5.67□□□□□ -1.5
BDNFP23560 AC058823.1-201ENST00000485315 474 ntBASIC5.67□□□□□ -1.5
BDNFP23560 AC091912.1-201ENST00000511351 248 ntBASIC5.67□□□□□ -1.5
BDNFP23560 RNA5SP373-201ENST00000517271 95 ntBASIC5.67□□□□□ -1.5
BDNFP23560 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.67□□□□□ -1.5
BDNFP23560 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.67□□□□□ -1.5
BDNFP23560 YWHABP2-201ENST00000540201 713 ntBASIC5.67□□□□□ -1.5
BDNFP23560 AC093014.1-201ENST00000548926 724 ntBASIC5.67□□□□□ -1.5
BDNFP23560 AC051619.2-201ENST00000559063 397 ntBASIC5.67□□□□□ -1.5
BDNFP23560 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.67□□□□□ -1.5
BDNFP23560 RN7SL356P-201ENST00000582228 248 ntBASIC5.67□□□□□ -1.5
BDNFP23560 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BDNFP23560 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BDNFP23560 AC069307.1-201ENST00000602820 447 ntBASIC5.67□□□□□ -1.5
BDNFP23560 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms