Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MTND1P20-201ENST00000430341 950 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.21□□□□□ -1.26
ERCC3P19447 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC3P19447 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC3P19447 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC3P19447 CR383656.1-201ENST00000484916 377 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 RPS27P23-201ENST00000487608 251 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 AC104685.1-201ENST00000502445 371 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC147055.4-201ENST00000504399 745 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 AC091965.3-201ENST00000506236 208 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC010285.3-201ENST00000511668 676 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 RNU6-885P-201ENST00000516607 104 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 RNA5SP271-201ENST00000516700 88 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC092709.1-201ENST00000521355 1045 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.21□□□□□ -1.26
ERCC3P19447 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC3P19447 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC3P19447 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC3P19447 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.21□□□□□ -1.26
ERCC3P19447 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 AC011445.2-201ENST00000599274 173 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 AC006270.3-201ENST00000605967 1036 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 AL445647.2-201ENST00000615170 130 ntBASIC7.21□□□□□ -1.26
ERCC3P19447 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
ERCC3P19447 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
ERCC3P19447 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
ERCC3P19447 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC3P19447 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
ERCC3P19447 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 RNU1-134P-201ENST00000362935 165 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 RNU6-619P-201ENST00000365146 108 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AL031577.2-201ENST00000404133 280 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AL023284.3-201ENST00000407767 334 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 RNU6-920P-201ENST00000410926 92 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 RPS15AP38-201ENST00000413110 372 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AC004865.1-201ENST00000442276 1003 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AC010307.1-201ENST00000467206 836 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AC106872.4-201ENST00000510050 523 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AC106800.3-201ENST00000511389 308 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 CR383658.1-201ENST00000514609 734 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 SNORD46.2-201ENST00000516021 102 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 IGKV1D-22-201ENST00000518953 324 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AC008562.1-201ENST00000521763 330 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 AC007954.1-201ENST00000554198 494 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC3P19447 AC083837.1-201ENST00000565297 2994 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC3P19447 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 AC004948.1-201ENST00000609858 672 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 AC124312.6-202ENST00000623624 418 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 CASC19-222ENST00000641321 1173 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 AC008627.1-201ENST00000517511 1704 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms