Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.18□□□□□ -1.74
CTLA4P16410 AL031119.1-201ENST00000404707 1879 ntBASIC4.18□□□□□ -1.74
CTLA4P16410 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CTLA4P16410 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.17□□□□□ -1.74
CTLA4P16410 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.17□□□□□ -1.74
CTLA4P16410 RN7SKP74-201ENST00000362849 309 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 MIR323B-201ENST00000385269 82 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 SNORD96B-201ENST00000386148 79 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.17□□□□□ -1.74
CTLA4P16410 PTP4A1P1-201ENST00000420539 515 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.17□□□□□ -1.74
CTLA4P16410 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.17□□□□□ -1.74
CTLA4P16410 SNRPFP2-201ENST00000440710 251 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.17□□□□□ -1.74
CTLA4P16410 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.17□□□□□ -1.74
CTLA4P16410 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.17□□□□□ -1.74
CTLA4P16410 RN7SL214P-201ENST00000487317 265 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 AC025164.1-201ENST00000496249 478 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 SCARNA22-201ENST00000503991 125 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 OR5M14P-201ENST00000506803 618 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.17□□□□□ -1.74
CTLA4P16410 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.17□□□□□ -1.74
CTLA4P16410 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.17□□□□□ -1.74
CTLA4P16410 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.17□□□□□ -1.74
CTLA4P16410 AL358913.1-201ENST00000554342 121 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 AC006272.2-201ENST00000594725 163 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 AC005520.3-201ENST00000602874 370 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 OR7A19P-201ENST00000608051 733 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 SNORD91B-202ENST00000608459 222 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 AC087385.3-201ENST00000620477 187 ntBASIC4.17□□□□□ -1.74
CTLA4P16410 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.17□□□□□ -1.74
CTLA4P16410 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.17□□□□□ -1.74
CTLA4P16410 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.17□□□□□ -1.74
CTLA4P16410 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CTLA4P16410 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.17□□□□□ -1.74
CTLA4P16410 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTLA4P16410 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CTLA4P16410 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 ZFRP1-201ENST00000457579 2970 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CTLA4P16410 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CTLA4P16410 RNA5SP191-201ENST00000362585 102 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 SNORA51.8-201ENST00000384234 132 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CTLA4P16410 COX6B1P1-201ENST00000415962 213 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 Z74021.1-201ENST00000423610 407 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 AC012519.1-201ENST00000424588 610 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 AC007559.1-201ENST00000428736 355 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.16□□□□□ -1.74
CTLA4P16410 CYCSP11-201ENST00000436426 315 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 PSMD10P3-201ENST00000437000 448 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.16□□□□□ -1.74
CTLA4P16410 SUMO2P1-206ENST00000445436 284 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 AC239798.3-201ENST00000454459 408 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 AL356390.1-201ENST00000455684 397 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 AC026348.1-201ENST00000462549 1053 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 OR11I1P-201ENST00000486033 954 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.16□□□□□ -1.74
CTLA4P16410 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.16□□□□□ -1.74
CTLA4P16410 KCTD9P6-201ENST00000522306 950 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 AC005000.1-201ENST00000536192 288 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.16□□□□□ -1.74
CTLA4P16410 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.16□□□□□ -1.74
CTLA4P16410 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.16□□□□□ -1.74
CTLA4P16410 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CTLA4P16410 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.16□□□□□ -1.74
CTLA4P16410 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
CTLA4P16410 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CTLA4P16410 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTLA4P16410 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms