Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 GAPDHP56-201ENST00000506031 988 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.5□□□□□ -1.37
SNRPA1P09661 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.5□□□□□ -1.37
SNRPA1P09661 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.5□□□□□ -1.37
SNRPA1P09661 RN7SKP265-201ENST00000516448 223 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.5□□□□□ -1.37
SNRPA1P09661 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.5□□□□□ -1.37
SNRPA1P09661 GLRXP2-201ENST00000555594 321 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 AC090888.2-201ENST00000559765 1144 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.5□□□□□ -1.37
SNRPA1P09661 AC098935.2-201ENST00000604222 466 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 AC025811.1-201ENST00000604312 472 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 AP001521.2-201ENST00000608772 546 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 MIR8084-201ENST00000614105 89 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 uc_338.18-201ENST00000615451 175 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.5□□□□□ -1.37
SNRPA1P09661 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.5□□□□□ -1.37
SNRPA1P09661 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.5□□□□□ -1.37
SNRPA1P09661 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SNRPA1P09661 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.5□□□□□ -1.37
SNRPA1P09661 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SNRPA1P09661 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 RN7SKP145-201ENST00000363291 303 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AF186996.5-201ENST00000418098 904 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.49□□□□□ -1.37
SNRPA1P09661 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.49□□□□□ -1.37
SNRPA1P09661 BX842559.2-201ENST00000451418 605 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 RNU7-157P-201ENST00000459600 66 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.49□□□□□ -1.37
SNRPA1P09661 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.49□□□□□ -1.37
SNRPA1P09661 BOLA3P3-201ENST00000505182 232 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.49□□□□□ -1.37
SNRPA1P09661 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AC021451.1-201ENST00000523498 1129 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 HIGD1AP5-201ENST00000529959 259 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AC233266.2-201ENST00000567067 528 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 MIR4330-201ENST00000579077 105 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 MTCO2P2-201ENST00000591258 225 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AC069431.2-201ENST00000604149 1099 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 AC004775.1-201ENST00000607389 753 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.49□□□□□ -1.37
SNRPA1P09661 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AC007275.1-201ENST00000621243 671 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.49□□□□□ -1.37
SNRPA1P09661 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
SNRPA1P09661 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AP000547.3-204ENST00000588548 2523 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.49□□□□□ -1.37
SNRPA1P09661 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
SNRPA1P09661 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.49□□□□□ -1.37
SNRPA1P09661 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNRPA1P09661 SCARNA15-201ENST00000607520 4325 ntBASIC6.49□□□□□ -1.37
SNRPA1P09661 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.49□□□□□ -1.37
SNRPA1P09661 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SNRPA1P09661 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.48□□□□□ -1.37
SNRPA1P09661 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SNRPA1P09661 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
SNRPA1P09661 RN7SKP74-201ENST00000362849 309 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AL021331.1-201ENST00000402817 582 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 SNORA77-201ENST00000408716 125 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AL590139.1-201ENST00000416267 400 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.48□□□□□ -1.37
SNRPA1P09661 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.48□□□□□ -1.37
SNRPA1P09661 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.48□□□□□ -1.37
SNRPA1P09661 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 AC063943.1-201ENST00000465434 453 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 RN7SL205P-201ENST00000490174 284 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 OR9N1P-202ENST00000494289 481 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 FABP5P6-201ENST00000510588 409 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.48□□□□□ -1.37
SNRPA1P09661 NPM1P52-201ENST00000518264 846 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 EEF1A1P37-201ENST00000522748 715 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms