Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL359513.1-201ENST00000614364 557 ntBASIC5.29□□□□□ -1.56
TPM1P09493 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM1P09493 AL359742.1-201ENST00000622497 540 ntBASIC5.29□□□□□ -1.56
TPM1P09493 AL353662.3-201ENST00000625131 237 ntBASIC5.29□□□□□ -1.56
TPM1P09493 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM1P09493 HSPA8P17-201ENST00000427029 1382 ntBASIC5.29□□□□□ -1.56
TPM1P09493 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.29□□□□□ -1.56
TPM1P09493 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.29□□□□□ -1.56
TPM1P09493 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM1P09493 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.28□□□□□ -1.56
TPM1P09493 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.28□□□□□ -1.56
TPM1P09493 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TPM1P09493 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.28□□□□□ -1.56
TPM1P09493 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.28□□□□□ -1.56
TPM1P09493 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 NXF4-202ENST00000416098 1465 ntBASIC5.28□□□□□ -1.56
TPM1P09493 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 OR52B1P-201ENST00000316506 909 ntBASIC5.28□□□□□ -1.56
TPM1P09493 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM1P09493 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
TPM1P09493 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TPM1P09493 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.28□□□□□ -1.56
TPM1P09493 AC099535.1-201ENST00000408928 371 ntBASIC5.28□□□□□ -1.56
TPM1P09493 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM1P09493 VN1R3-201ENST00000418822 919 ntBASIC5.28□□□□□ -1.56
TPM1P09493 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM1P09493 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM1P09493 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.28□□□□□ -1.56
TPM1P09493 AC097484.1-201ENST00000471148 389 ntBASIC5.28□□□□□ -1.56
TPM1P09493 OR2AO1P-201ENST00000476497 403 ntBASIC5.28□□□□□ -1.56
TPM1P09493 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM1P09493 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM1P09493 AC107918.3-201ENST00000533272 382 ntBASIC5.28□□□□□ -1.56
TPM1P09493 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.28□□□□□ -1.56
TPM1P09493 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM1P09493 AP000919.1-201ENST00000582850 985 ntBASIC5.28□□□□□ -1.56
TPM1P09493 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.28□□□□□ -1.56
TPM1P09493 SLC25A36P1-201ENST00000590111 465 ntBASIC5.28□□□□□ -1.56
TPM1P09493 AC079395.2-201ENST00000610982 737 ntBASIC5.28□□□□□ -1.56
TPM1P09493 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.28□□□□□ -1.56
TPM1P09493 SNX18P1Y-201ENST00000616231 511 ntBASIC5.28□□□□□ -1.56
TPM1P09493 AL512356.3-201ENST00000623005 461 ntBASIC5.28□□□□□ -1.56
TPM1P09493 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.28□□□□□ -1.56
TPM1P09493 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.28□□□□□ -1.56
TPM1P09493 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM1P09493 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TPM1P09493 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TPM1P09493 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TPM1P09493 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TPM1P09493 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.27□□□□□ -1.57
TPM1P09493 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.27□□□□□ -1.57
TPM1P09493 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TPM1P09493 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TPM1P09493 RNA5SP183-201ENST00000362452 119 ntBASIC5.27□□□□□ -1.57
TPM1P09493 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TPM1P09493 AL031985.1-201ENST00000392713 418 ntBASIC5.27□□□□□ -1.57
TPM1P09493 DUTP5-201ENST00000406790 469 ntBASIC5.27□□□□□ -1.57
TPM1P09493 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.27□□□□□ -1.57
TPM1P09493 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TPM1P09493 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.27□□□□□ -1.57
TPM1P09493 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.27□□□□□ -1.57
TPM1P09493 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.27□□□□□ -1.57
TPM1P09493 VN2R3P-201ENST00000422626 1412 ntBASIC5.27□□□□□ -1.57
TPM1P09493 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.27□□□□□ -1.57
TPM1P09493 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.27□□□□□ -1.57
TPM1P09493 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.27□□□□□ -1.57
TPM1P09493 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.27□□□□□ -1.57
TPM1P09493 PPIAP19-201ENST00000486414 492 ntBASIC5.27□□□□□ -1.57
TPM1P09493 RN7SL97P-201ENST00000486780 299 ntBASIC5.27□□□□□ -1.57
TPM1P09493 HMGN2P25-201ENST00000486956 268 ntBASIC5.27□□□□□ -1.57
TPM1P09493 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TPM1P09493 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.27□□□□□ -1.57
TPM1P09493 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.27□□□□□ -1.57
TPM1P09493 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.27□□□□□ -1.57
TPM1P09493 OR4A46P-201ENST00000527255 933 ntBASIC5.27□□□□□ -1.57
TPM1P09493 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.27□□□□□ -1.57
TPM1P09493 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.27□□□□□ -1.57
TPM1P09493 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.27□□□□□ -1.57
TPM1P09493 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.27□□□□□ -1.57
TPM1P09493 AC011815.3-201ENST00000624194 473 ntBASIC5.27□□□□□ -1.57
TPM1P09493 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.27□□□□□ -1.57
TPM1P09493 CASC19-264ENST00000641912 1184 ntBASIC5.27□□□□□ -1.57
TPM1P09493 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.27□□□□□ -1.57
TPM1P09493 AL121950.1-201ENST00000624993 2077 ntBASIC5.27□□□□□ -1.57
TPM1P09493 IRF5P1-201ENST00000504852 2164 ntBASIC5.26□□□□□ -1.57
TPM1P09493 HCFC2P1-201ENST00000392864 1592 ntBASIC5.26□□□□□ -1.57
TPM1P09493 AC017104.4-201ENST00000636283 1592 ntBASIC5.26□□□□□ -1.57
TPM1P09493 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TPM1P09493 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM1P09493 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.26□□□□□ -1.57
TPM1P09493 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TPM1P09493 AL357515.1-201ENST00000402967 542 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms