Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.51□□□□□ -1.53
RB1P06400 MTND3P24-201ENST00000506306 329 ntBASIC5.51□□□□□ -1.53
RB1P06400 MTCO1P31-201ENST00000506355 492 ntBASIC5.51□□□□□ -1.53
RB1P06400 BTG4P1-201ENST00000510421 183 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.51□□□□□ -1.53
RB1P06400 SCARNA20.4-201ENST00000516969 131 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC022360.1-201ENST00000521058 340 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.51□□□□□ -1.53
RB1P06400 AC109635.6-201ENST00000525487 1113 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.51□□□□□ -1.53
RB1P06400 AC087888.1-201ENST00000550884 1254 ntBASIC5.51□□□□□ -1.53
RB1P06400 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
RB1P06400 MIR4284-201ENST00000578924 81 ntBASIC5.51□□□□□ -1.53
RB1P06400 MIR3667-201ENST00000581025 74 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC068790.4-201ENST00000602474 263 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC005972.3-201ENST00000606304 481 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC019193.2-201ENST00000610012 634 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC244107.2-201ENST00000611773 76 ntBASIC5.51□□□□□ -1.53
RB1P06400 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.51□□□□□ -1.53
RB1P06400 AC025016.1-201ENST00000616746 682 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.51□□□□□ -1.53
RB1P06400 MIR7703-201ENST00000620784 77 ntBASIC5.51□□□□□ -1.53
RB1P06400 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.51□□□□□ -1.53
RB1P06400 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.51□□□□□ -1.53
RB1P06400 AC110792.3-201ENST00000595906 1614 ntBASIC5.51□□□□□ -1.53
RB1P06400 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.51□□□□□ -1.53
RB1P06400 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.51□□□□□ -1.53
RB1P06400 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RB1P06400 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RB1P06400 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 AC068446.1-201ENST00000556425 1549 ntBASIC5.5□□□□□ -1.53
RB1P06400 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.5□□□□□ -1.53
RB1P06400 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.5□□□□□ -1.53
RB1P06400 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 AC092681.1-201ENST00000297369 291 ntBASIC5.5□□□□□ -1.53
RB1P06400 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RB1P06400 Y_RNA.110-201ENST00000363220 99 ntBASIC5.5□□□□□ -1.53
RB1P06400 RNA5SP505-201ENST00000364748 108 ntBASIC5.5□□□□□ -1.53
RB1P06400 RNU4-7P-201ENST00000364758 141 ntBASIC5.5□□□□□ -1.53
RB1P06400 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RB1P06400 MT-TP-201ENST00000387461 68 ntBASIC5.5□□□□□ -1.53
RB1P06400 AL356057.1-202ENST00000402263 756 ntBASIC5.5□□□□□ -1.53
RB1P06400 SNORA11-201ENST00000408789 128 ntBASIC5.5□□□□□ -1.53
RB1P06400 VTI1BP4-201ENST00000427516 527 ntBASIC5.5□□□□□ -1.53
RB1P06400 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.5□□□□□ -1.53
RB1P06400 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.5□□□□□ -1.53
RB1P06400 AC073465.2-201ENST00000440938 498 ntBASIC5.5□□□□□ -1.53
RB1P06400 AL353898.1-201ENST00000444055 238 ntBASIC5.5□□□□□ -1.53
RB1P06400 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.5□□□□□ -1.53
RB1P06400 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.5□□□□□ -1.53
RB1P06400 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.5□□□□□ -1.53
RB1P06400 CABYRP1-201ENST00000465493 1045 ntBASIC5.5□□□□□ -1.53
RB1P06400 RN7SL319P-201ENST00000480656 221 ntBASIC5.5□□□□□ -1.53
RB1P06400 AC068587.1-201ENST00000483613 781 ntBASIC5.5□□□□□ -1.53
RB1P06400 AC022133.1-201ENST00000490961 571 ntBASIC5.5□□□□□ -1.53
RB1P06400 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.5□□□□□ -1.53
RB1P06400 NPM1P28-201ENST00000492269 840 ntBASIC5.5□□□□□ -1.53
RB1P06400 RPL23AP72-201ENST00000492447 435 ntBASIC5.5□□□□□ -1.53
RB1P06400 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.5□□□□□ -1.53
RB1P06400 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.5□□□□□ -1.53
RB1P06400 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RB1P06400 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.5□□□□□ -1.53
RB1P06400 GCSHP4-201ENST00000538792 439 ntBASIC5.5□□□□□ -1.53
RB1P06400 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.5□□□□□ -1.53
RB1P06400 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.5□□□□□ -1.53
RB1P06400 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.5□□□□□ -1.53
RB1P06400 MTCO3P22-201ENST00000603219 784 ntBASIC5.5□□□□□ -1.53
RB1P06400 AC008814.1-201ENST00000603797 406 ntBASIC5.5□□□□□ -1.53
RB1P06400 AL135786.2-201ENST00000608422 615 ntBASIC5.5□□□□□ -1.53
RB1P06400 RPL23AP61-201ENST00000623642 466 ntBASIC5.5□□□□□ -1.53
RB1P06400 AP000720.1-201ENST00000625091 483 ntBASIC5.5□□□□□ -1.53
RB1P06400 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RB1P06400 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.5□□□□□ -1.53
RB1P06400 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.5□□□□□ -1.53
RB1P06400 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RB1P06400 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RB1P06400 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.5□□□□□ -1.53
RB1P06400 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RB1P06400 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.49□□□□□ -1.53
RB1P06400 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.49□□□□□ -1.53
RB1P06400 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.49□□□□□ -1.53
RB1P06400 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 AP000473.2-201ENST00000602659 1537 ntBASIC5.49□□□□□ -1.53
RB1P06400 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.49□□□□□ -1.53
RB1P06400 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.49□□□□□ -1.53
RB1P06400 RNU6-31P-201ENST00000384388 108 ntBASIC5.49□□□□□ -1.53
RB1P06400 SNORA40.4-201ENST00000390971 128 ntBASIC5.49□□□□□ -1.53
RB1P06400 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms