Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC135352.1-201ENST00000506173 1418 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 Z74021.1-201ENST00000423610 407 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 RPL23AP37-201ENST00000479658 549 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 RPS4XP18-201ENST00000495480 763 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 RPS26P24-201ENST00000497656 331 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 RNF138P2-201ENST00000603490 592 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 COX6CP4-201ENST00000605798 228 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC234782.5-201ENST00000617723 324 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC022106.2-201ENST00000620114 757 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 TCP1P3-201ENST00000414406 1498 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 XKRY2-202ENST00000623874 1581 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 XKRY-202ENST00000624960 1581 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC068870.3-201ENST00000625077 2536 ntBASIC4.72□□□□□ -1.65
HLA-DQB2P05538 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB2P05538 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
HLA-DQB2P05538 MAPK10-263ENST00000641052 4307 ntBASIC4.71□□□□□ -1.65
HLA-DQB2P05538 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DQB2P05538 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.71□□□□□ -1.65
HLA-DQB2P05538 AL355852.1-201ENST00000454081 1771 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 GNG5P5-201ENST00000420444 220 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 RPL21P43-201ENST00000425440 472 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AL049745.1-201ENST00000433953 286 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AL161722.1-201ENST00000446972 1032 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AL445433.1-201ENST00000457507 257 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 TPT1P1-201ENST00000458495 518 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 RPL12P20-201ENST00000475538 479 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AC098799.3-201ENST00000506095 438 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AL671862.1-201ENST00000515851 349 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AC209154.1-201ENST00000582156 337 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AC005520.3-201ENST00000602874 370 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 U3.53-201ENST00000628922 216 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AL391684.1-202ENST00000641293 1636 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 AC099654.3-201ENST00000447087 1546 ntBASIC4.71□□□□□ -1.66
HLA-DQB2P05538 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQB2P05538 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC097461.1-201ENST00000568928 2821 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 RN7SKP74-201ENST00000362849 309 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 RN7SKP103-201ENST00000363848 320 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AL133270.1-201ENST00000402635 279 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 RPL34P6-201ENST00000432390 345 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC006967.1-201ENST00000467608 589 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC104763.1-201ENST00000475274 360 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC007016.1-201ENST00000512110 244 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC068993.1-201ENST00000546724 589 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC007448.1-201ENST00000582714 234 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC100827.5-201ENST00000615883 426 ntBASIC4.7□□□□□ -1.66
HLA-DQB2P05538 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 MTCO1P7-201ENST00000419523 1542 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms