Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AL139039.2-201ENST00000407436 479 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 RNU4-34P-201ENST00000410431 124 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 TRGV7-201ENST00000427089 353 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 TCEA1P1-201ENST00000449716 880 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 IGHV5-78-201ENST00000450948 295 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AP000942.1-201ENST00000463969 747 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 RPSAP50-201ENST00000481955 852 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC108022.1-201ENST00000493466 478 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC093763.2-201ENST00000505334 1223 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC004980.4-201ENST00000513375 203 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC011447.4-201ENST00000587562 111 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC091979.2-201ENST00000607514 214 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC009163.6-201ENST00000612367 342 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AP005212.4-201ENST00000614206 710 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 AC019206.1-201ENST00000621938 425 ntBASIC4.3□□□□□ -1.72
HLA-DPB1P04440 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPB1P04440 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 MIR765-201ENST00000390226 114 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AL136116.2-201ENST00000404020 785 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 RN7SKP278-201ENST00000410504 342 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AL356968.2-201ENST00000412769 1257 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 BMS1P13-201ENST00000417301 885 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 CYCSP10-201ENST00000417973 294 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC093162.1-201ENST00000419682 124 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 DDX39BP1-205ENST00000422507 192 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AL451139.1-201ENST00000434718 346 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 RHOT1P3-201ENST00000436571 331 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC092647.3-201ENST00000443044 633 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 KNOP1P3-201ENST00000446933 426 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AL161722.1-201ENST00000446972 1032 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 NDUFA5P8-201ENST00000449019 346 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 RN7SL244P-201ENST00000493405 297 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 OR5M14P-201ENST00000506803 618 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC147055.3-201ENST00000510547 851 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 OR7E128P-201ENST00000532736 1024 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 NMNAT1P1-201ENST00000554095 876 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC005520.3-201ENST00000602874 370 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 RPL26P30-202ENST00000602923 645 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC130352.1-201ENST00000602979 661 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC233280.2-201ENST00000603917 1070 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC093799.2-201ENST00000610062 578 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC096586.2-201ENST00000610260 441 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC016769.4-201ENST00000616893 535 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 AC079298.2-201ENST00000623885 459 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 THAP12P4-201ENST00000528321 2266 ntBASIC4.29□□□□□ -1.72
HLA-DPB1P04440 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DPB1P04440 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 RNA5SP507-201ENST00000363603 121 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms