Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
APOBP04114 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
APOBP04114 SNORA71.2-201ENST00000364941 134 ntBASIC2.82□□□□□ -1.96
APOBP04114 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBP04114 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBP04114 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBP04114 AC016550.3-201ENST00000515706 767 ntBASIC2.82□□□□□ -1.96
APOBP04114 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.82□□□□□ -1.96
APOBP04114 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC2.82□□□□□ -1.96
APOBP04114 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC2.82□□□□□ -1.96
APOBP04114 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.82□□□□□ -1.96
APOBP04114 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOBP04114 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC2.81□□□□□ -1.96
APOBP04114 PTMAP2-201ENST00000397627 327 ntBASIC2.81□□□□□ -1.96
APOBP04114 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.81□□□□□ -1.96
APOBP04114 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.81□□□□□ -1.96
APOBP04114 OR5BC1P-201ENST00000529327 739 ntBASIC2.81□□□□□ -1.96
APOBP04114 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.81□□□□□ -1.96
APOBP04114 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
APOBP04114 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC2.81□□□□□ -1.96
APOBP04114 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
APOBP04114 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC2.81□□□□□ -1.96
APOBP04114 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
APOBP04114 AC092162.3-201ENST00000624511 1624 ntBASIC2.81□□□□□ -1.96
APOBP04114 RNA5SP223-201ENST00000365174 120 ntBASIC2.81□□□□□ -1.96
APOBP04114 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.81□□□□□ -1.96
APOBP04114 TCEA1P4-201ENST00000415066 844 ntBASIC2.81□□□□□ -1.96
APOBP04114 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 NFYAP1-201ENST00000431953 972 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC007389.2-201ENST00000434630 306 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC104651.2-201ENST00000447549 528 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC090589.1-201ENST00000473109 362 ntBASIC2.81□□□□□ -1.96
APOBP04114 GMPSP1-201ENST00000514075 579 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC027667.1-201ENST00000545814 304 ntBASIC2.81□□□□□ -1.96
APOBP04114 RN7SL600P-201ENST00000581811 299 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC2.81□□□□□ -1.96
APOBP04114 SNORA51-201ENST00000606420 132 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC026367.3-201ENST00000619032 590 ntBASIC2.81□□□□□ -1.96
APOBP04114 ZFRP1-201ENST00000457579 2970 ntBASIC2.81□□□□□ -1.96
APOBP04114 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
APOBP04114 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
APOBP04114 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
APOBP04114 AC123769.2-201ENST00000624332 5984 ntBASIC2.81□□□□□ -1.96
APOBP04114 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC2.81□□□□□ -1.96
APOBP04114 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
APOBP04114 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 LCMT1-AS2-202ENST00000565214 5666 ntBASIC2.81□□□□□ -1.96
APOBP04114 MIR383-201ENST00000362257 73 ntBASIC2.81□□□□□ -1.96
APOBP04114 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
APOBP04114 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC2.81□□□□□ -1.96
APOBP04114 MRPS21P3-201ENST00000436696 262 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC105137.1-201ENST00000484355 562 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.81□□□□□ -1.96
APOBP04114 SUMO2P19-201ENST00000518920 295 ntBASIC2.81□□□□□ -1.96
APOBP04114 TVP23BP1-201ENST00000557500 617 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC015912.2-201ENST00000571053 181 ntBASIC2.81□□□□□ -1.96
APOBP04114 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC2.81□□□□□ -1.96
APOBP04114 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
APOBP04114 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
APOBP04114 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
APOBP04114 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.81□□□□□ -1.96
APOBP04114 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 RPL7P15-201ENST00000461190 712 ntBASIC2.81□□□□□ -1.96
APOBP04114 AC146944.2-203ENST00000502493 354 ntBASIC2.81□□□□□ -1.96
APOBP04114 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.81□□□□□ -1.96
APOBP04114 AC139495.1-202ENST00000513164 354 ntBASIC2.81□□□□□ -1.96
APOBP04114 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.81□□□□□ -1.96
APOBP04114 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC2.81□□□□□ -1.96
APOBP04114 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
APOBP04114 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms