Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LDLRP01130 AL109941.1-201ENST00000401925 229 ntBASIC5.09□□□□□ -1.59
LDLRP01130 GSTA12P-201ENST00000402398 508 ntBASIC5.09□□□□□ -1.59
LDLRP01130 RNA5SP296-201ENST00000410523 111 ntBASIC5.09□□□□□ -1.59
LDLRP01130 FAR2P2-201ENST00000413041 594 ntBASIC5.09□□□□□ -1.59
LDLRP01130 RPS26P13-201ENST00000419030 330 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.09□□□□□ -1.59
LDLRP01130 FAR2P4-202ENST00000425399 584 ntBASIC5.09□□□□□ -1.59
LDLRP01130 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 AL513321.1-201ENST00000441175 761 ntBASIC5.09□□□□□ -1.59
LDLRP01130 GTF3AP5-201ENST00000442645 697 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 AL627224.1-201ENST00000448334 444 ntBASIC5.09□□□□□ -1.59
LDLRP01130 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 AP000547.1-201ENST00000454360 617 ntBASIC5.09□□□□□ -1.59
LDLRP01130 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.09□□□□□ -1.59
LDLRP01130 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LDLRP01130 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.09□□□□□ -1.59
LDLRP01130 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 GYG1P1-201ENST00000460864 698 ntBASIC5.09□□□□□ -1.59
LDLRP01130 RPS4XP12-201ENST00000461747 709 ntBASIC5.09□□□□□ -1.59
LDLRP01130 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.09□□□□□ -1.59
LDLRP01130 CABYRP1-201ENST00000465493 1045 ntBASIC5.09□□□□□ -1.59
LDLRP01130 RPS29P22-201ENST00000472363 168 ntBASIC5.09□□□□□ -1.59
LDLRP01130 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.09□□□□□ -1.59
LDLRP01130 AC007686.1-201ENST00000488511 463 ntBASIC5.09□□□□□ -1.59
LDLRP01130 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 AC010468.3-201ENST00000508225 458 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AC093770.1-201ENST00000511559 571 ntBASIC5.09□□□□□ -1.59
LDLRP01130 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.09□□□□□ -1.59
LDLRP01130 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 RNU6-513P-201ENST00000516104 104 ntBASIC5.09□□□□□ -1.59
LDLRP01130 FTH1P11-201ENST00000517577 551 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 DUX4L52-201ENST00000549363 777 ntBASIC5.09□□□□□ -1.59
LDLRP01130 NOP56P3-201ENST00000549457 385 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.09□□□□□ -1.59
LDLRP01130 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 MIR4675-201ENST00000577898 77 ntBASIC5.09□□□□□ -1.59
LDLRP01130 MIR3936-201ENST00000584304 110 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.09□□□□□ -1.59
LDLRP01130 AC244107.2-201ENST00000611773 76 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AL158062.1-201ENST00000619632 745 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AC006249.1-201ENST00000621223 471 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AC023510.2-201ENST00000622162 746 ntBASIC5.09□□□□□ -1.59
LDLRP01130 AC106858.1-201ENST00000637497 429 ntBASIC5.09□□□□□ -1.59
LDLRP01130 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LDLRP01130 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.09□□□□□ -1.59
LDLRP01130 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.09□□□□□ -1.6
LDLRP01130 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.09□□□□□ -1.6
LDLRP01130 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.09□□□□□ -1.6
LDLRP01130 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LDLRP01130 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LDLRP01130 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 AC017002.4-201ENST00000604721 1525 ntBASIC5.08□□□□□ -1.6
LDLRP01130 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LDLRP01130 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 RNA5SP305-201ENST00000362665 119 ntBASIC5.08□□□□□ -1.6
LDLRP01130 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LDLRP01130 RNU1-77P-201ENST00000390868 162 ntBASIC5.08□□□□□ -1.6
LDLRP01130 RAB28P1-201ENST00000411517 641 ntBASIC5.08□□□□□ -1.6
LDLRP01130 MTCYBP7-201ENST00000419540 1134 ntBASIC5.08□□□□□ -1.6
LDLRP01130 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.08□□□□□ -1.6
LDLRP01130 AL121882.1-201ENST00000422893 417 ntBASIC5.08□□□□□ -1.6
LDLRP01130 SRSF1P1-201ENST00000424058 520 ntBASIC5.08□□□□□ -1.6
LDLRP01130 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 AC019185.1-201ENST00000442718 389 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms