Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 LINC01808-202ENST00000641680 1116 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
VPS4BO75351 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS4BO75351 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS4BO75351 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 AP004607.3-201ENST00000530354 3915 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS4BO75351 LINC02019-201ENST00000608605 2060 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.61□□□□□ -1.51
VPS4BO75351 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 SELENOWP1-201ENST00000322792 252 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VPS4BO75351 RNU4-7P-201ENST00000364758 141 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS4BO75351 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VPS4BO75351 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 AL356320.2-201ENST00000417263 507 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 HMGB3P6-201ENST00000444896 598 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AC092685.1-201ENST00000447960 1243 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 MRPL35P4-201ENST00000453682 566 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 RN7SL515P-201ENST00000463999 297 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 PROS2P-201ENST00000474651 1951 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AC099521.1-201ENST00000482557 334 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 HPRT1P2-201ENST00000505250 544 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC118465.1-201ENST00000513820 1271 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 DEFB130C-202ENST00000530001 230 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC008126.1-201ENST00000549019 480 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.61□□□□□ -1.51
VPS4BO75351 RBM22P12-201ENST00000567098 1255 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS4BO75351 MIR4700-201ENST00000578311 74 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC124856.1-201ENST00000600819 896 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AL049844.2-201ENST00000604280 628 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AL139344.1-201ENST00000605228 195 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AC096586.1-201ENST00000610267 561 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC017037.3-201ENST00000625016 472 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS4BO75351 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VPS4BO75351 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC083843.2-201ENST00000568248 6253 ntBASIC5.61□□□□□ -1.51
VPS4BO75351 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS4BO75351 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS4BO75351 AC068870.3-201ENST00000625077 2536 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS4BO75351 GVINP1-202ENST00000531871 7271 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS4BO75351 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS4BO75351 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 RNU6-224P-201ENST00000384055 107 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms