Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC005412.1-201ENST00000580812 1049 ntBASIC4.67□□□□□ -1.66
LMX1BO60663 PRPF19P1-201ENST00000584766 898 ntBASIC4.67□□□□□ -1.66
LMX1BO60663 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.67□□□□□ -1.66
LMX1BO60663 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.67□□□□□ -1.66
LMX1BO60663 AC012616.1-201ENST00000600294 197 ntBASIC4.67□□□□□ -1.66
LMX1BO60663 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.67□□□□□ -1.66
LMX1BO60663 AL606834.3-201ENST00000602615 496 ntBASIC4.67□□□□□ -1.66
LMX1BO60663 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.67□□□□□ -1.66
LMX1BO60663 AL022394.1-201ENST00000606979 292 ntBASIC4.67□□□□□ -1.66
LMX1BO60663 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.67□□□□□ -1.66
LMX1BO60663 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.67□□□□□ -1.66
LMX1BO60663 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMX1BO60663 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LMX1BO60663 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.67□□□□□ -1.66
LMX1BO60663 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMX1BO60663 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMX1BO60663 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.67□□□□□ -1.66
LMX1BO60663 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMX1BO60663 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LMX1BO60663 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LMX1BO60663 RN7SKP115-201ENST00000363177 317 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 RNU6-697P-201ENST00000363348 107 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 RNU1-77P-201ENST00000390868 162 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AL645733.1-201ENST00000402250 217 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 OR4K12P-201ENST00000406538 961 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 RN7SKP273-201ENST00000411392 314 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
LMX1BO60663 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.66□□□□□ -1.66
LMX1BO60663 HSPD1P12-201ENST00000429127 1069 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.66□□□□□ -1.66
LMX1BO60663 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.66□□□□□ -1.66
LMX1BO60663 RAB9AP5-201ENST00000437794 597 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AL117351.1-201ENST00000438864 766 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 RAB9AP2-201ENST00000443911 597 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.66□□□□□ -1.66
LMX1BO60663 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.66□□□□□ -1.66
LMX1BO60663 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LMX1BO60663 METTL15P1-201ENST00000481421 1045 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC058823.1-201ENST00000485315 474 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC010627.1-201ENST00000503819 1294 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 PGAM1P13-201ENST00000507497 754 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 MTND6P2-201ENST00000512226 524 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.66□□□□□ -1.66
LMX1BO60663 AC108043.1-201ENST00000512696 574 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.66□□□□□ -1.66
LMX1BO60663 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.66□□□□□ -1.66
LMX1BO60663 MORF4L1P3-201ENST00000525966 950 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC022832.1-201ENST00000530718 645 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.66□□□□□ -1.66
LMX1BO60663 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.66□□□□□ -1.66
LMX1BO60663 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.66□□□□□ -1.66
LMX1BO60663 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.66□□□□□ -1.66
LMX1BO60663 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.66□□□□□ -1.66
LMX1BO60663 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 MTCYBP13-201ENST00000578634 1093 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 MIR4509-3-201ENST00000578671 94 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 RN7SL708P-201ENST00000580952 299 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 MIR4660-201ENST00000583549 74 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 MIR4509-2-201ENST00000583920 94 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC005242.1-201ENST00000585658 438 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 AF230666.2-201ENST00000602328 725 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 ELOCP35-201ENST00000604289 336 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC026741.1-201ENST00000605892 482 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AL445222.1-201ENST00000607259 628 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AP005229.2-201ENST00000609980 697 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 Mico1.1-201ENST00000611698 204 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AL139407.1-201ENST00000613826 1175 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 MIR4509-1-201ENST00000618224 94 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 AC006386.1-201ENST00000619436 415 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.66□□□□□ -1.66
LMX1BO60663 AC091932.2-201ENST00000623014 291 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 AL590396.4-201ENST00000636779 956 ntBASIC4.66□□□□□ -1.66
LMX1BO60663 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMX1BO60663 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LMX1BO60663 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.66□□□□□ -1.66
LMX1BO60663 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LMX1BO60663 ZNF733P-202ENST00000444809 1573 ntBASIC4.65□□□□□ -1.66
LMX1BO60663 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LMX1BO60663 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LMX1BO60663 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms