Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.22□□□□□ -1.09
CUX2O14529 AGGF1P6-201ENST00000569213 976 ntBASIC8.22□□□□□ -1.09
CUX2O14529 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC8.22□□□□□ -1.09
CUX2O14529 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CUX2O14529 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CUX2O14529 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC8.22□□□□□ -1.09
CUX2O14529 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CUX2O14529 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CUX2O14529 AC025031.4-201ENST00000621248 3271 ntBASIC8.21□□□□□ -1.09
CUX2O14529 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
CUX2O14529 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CUX2O14529 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.21□□□□□ -1.09
CUX2O14529 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
CUX2O14529 AL390316.1-201ENST00000406279 553 ntBASIC8.21□□□□□ -1.09
CUX2O14529 NPM1P18-201ENST00000434232 732 ntBASIC8.21□□□□□ -1.09
CUX2O14529 AC023271.1-201ENST00000445936 1090 ntBASIC8.21□□□□□ -1.09
CUX2O14529 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC8.21□□□□□ -1.09
CUX2O14529 AC041039.1-201ENST00000485656 536 ntBASIC8.21□□□□□ -1.09
CUX2O14529 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC8.21□□□□□ -1.09
CUX2O14529 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.21□□□□□ -1.09
CUX2O14529 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.21□□□□□ -1.09
CUX2O14529 AL451086.1-201ENST00000605596 223 ntBASIC8.21□□□□□ -1.09
CUX2O14529 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC8.21□□□□□ -1.09
CUX2O14529 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
CUX2O14529 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC8.21□□□□□ -1.1
CUX2O14529 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CUX2O14529 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC8.21□□□□□ -1.1
CUX2O14529 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
CUX2O14529 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CUX2O14529 AC005261.4-201ENST00000600047 1385 ntBASIC8.21□□□□□ -1.1
CUX2O14529 NLN-202ENST00000502464 8354 ntTSL 5 BASIC8.21□□□□□ -1.1
CUX2O14529 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CUX2O14529 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CUX2O14529 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.21□□□□□ -1.1
CUX2O14529 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CUX2O14529 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CUX2O14529 AC009238.2-201ENST00000431026 355 ntBASIC8.2□□□□□ -1.1
CUX2O14529 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC8.2□□□□□ -1.1
CUX2O14529 RN7SL441P-201ENST00000492388 296 ntBASIC8.2□□□□□ -1.1
CUX2O14529 MTND4LP2-201ENST00000502312 285 ntBASIC8.2□□□□□ -1.1
CUX2O14529 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC8.2□□□□□ -1.1
CUX2O14529 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC8.2□□□□□ -1.1
CUX2O14529 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC8.2□□□□□ -1.1
CUX2O14529 AC007786.3-201ENST00000615154 596 ntBASIC8.2□□□□□ -1.1
CUX2O14529 AP005019.3-201ENST00000620418 560 ntBASIC8.2□□□□□ -1.1
CUX2O14529 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUX2O14529 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CUX2O14529 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CUX2O14529 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.2□□□□□ -1.1
CUX2O14529 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC8.2□□□□□ -1.1
CUX2O14529 DMD-205ENST00000359836 7339 ntTSL 5 BASIC8.2□□□□□ -1.1
CUX2O14529 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUX2O14529 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC8.2□□□□□ -1.1
CUX2O14529 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUX2O14529 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC8.2□□□□□ -1.1
CUX2O14529 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC8.2□□□□□ -1.1
CUX2O14529 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUX2O14529 TANK-206ENST00000406287 875 ntTSL 5 BASIC8.19□□□□□ -1.1
CUX2O14529 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC8.19□□□□□ -1.1
CUX2O14529 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.19□□□□□ -1.1
CUX2O14529 RPL19P16-201ENST00000433839 588 ntBASIC8.19□□□□□ -1.1
CUX2O14529 MTND2P40-201ENST00000436718 841 ntBASIC8.19□□□□□ -1.1
CUX2O14529 HMGB1P4-201ENST00000455362 567 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC8.19□□□□□ -1.1
CUX2O14529 OR2A3P-201ENST00000493774 953 ntBASIC8.19□□□□□ -1.1
CUX2O14529 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.19□□□□□ -1.1
CUX2O14529 AC010476.1-201ENST00000519111 851 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.19□□□□□ -1.1
CUX2O14529 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC8.19□□□□□ -1.1
CUX2O14529 MIR7853-201ENST00000584820 132 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC8.19□□□□□ -1.1
CUX2O14529 AC091979.2-201ENST00000607514 214 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AC019206.1-201ENST00000621938 425 ntBASIC8.19□□□□□ -1.1
CUX2O14529 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC8.19□□□□□ -1.1
CUX2O14529 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC8.19□□□□□ -1.1
CUX2O14529 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUX2O14529 CASC19-204ENST00000641001 2055 ntBASIC8.19□□□□□ -1.1
CUX2O14529 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC8.19□□□□□ -1.1
CUX2O14529 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUX2O14529 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUX2O14529 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC8.19□□□□□ -1.1
CUX2O14529 RPL7AP49-201ENST00000429522 581 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AL591438.1-201ENST00000433508 581 ntBASIC8.19□□□□□ -1.1
CUX2O14529 TMX2P1-201ENST00000436507 708 ntBASIC8.19□□□□□ -1.1
CUX2O14529 RPL7AP61-201ENST00000443410 636 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC8.19□□□□□ -1.1
CUX2O14529 AC016772.1-201ENST00000444170 1261 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.19□□□□□ -1.1
CUX2O14529 RN7SL98P-201ENST00000462271 300 ntBASIC8.19□□□□□ -1.1
CUX2O14529 VN1R105P-201ENST00000486595 910 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC8.19□□□□□ -1.1
CUX2O14529 AC110768.1-201ENST00000509222 400 ntBASIC8.19□□□□□ -1.1
CUX2O14529 OR5BC1P-201ENST00000529327 739 ntBASIC8.19□□□□□ -1.1
CUX2O14529 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.19□□□□□ -1.1
CUX2O14529 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.19□□□□□ -1.1
CUX2O14529 AL133243.1-201ENST00000614487 366 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AL162574.1-201ENST00000615702 950 ntBASIC8.19□□□□□ -1.1
CUX2O14529 AC012314.7-201ENST00000619693 93 ntBASIC8.19□□□□□ -1.1
CUX2O14529 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC8.19□□□□□ -1.1
CUX2O14529 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms