Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
O00370 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.32□□□□□ -1.56
O00370 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
O00370 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.32□□□□□ -1.56
O00370 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
O00370 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.31□□□□□ -1.56
O00370 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
O00370 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.31□□□□□ -1.56
O00370 SNORA70.10-201ENST00000384515 134 ntBASIC5.31□□□□□ -1.56
O00370 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
O00370 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
O00370 RPL5P19-201ENST00000404228 893 ntBASIC5.31□□□□□ -1.56
O00370 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
O00370 AC013470.3-201ENST00000420252 1194 ntBASIC5.31□□□□□ -1.56
O00370 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.31□□□□□ -1.56
O00370 BRWD1P3-201ENST00000428816 390 ntBASIC5.31□□□□□ -1.56
O00370 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.31□□□□□ -1.56
O00370 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 AC092647.3-201ENST00000443044 633 ntBASIC5.31□□□□□ -1.56
O00370 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.31□□□□□ -1.56
O00370 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.31□□□□□ -1.56
O00370 AL356390.1-201ENST00000455684 397 ntBASIC5.31□□□□□ -1.56
O00370 AL133244.1-201ENST00000456007 258 ntBASIC5.31□□□□□ -1.56
O00370 AC089999.1-201ENST00000460336 374 ntBASIC5.31□□□□□ -1.56
O00370 RPL7AP6-201ENST00000477943 801 ntBASIC5.31□□□□□ -1.56
O00370 RN7SL244P-201ENST00000493405 297 ntBASIC5.31□□□□□ -1.56
O00370 RN7SKP46-201ENST00000515942 234 ntBASIC5.31□□□□□ -1.56
O00370 RNA5SP303-201ENST00000516192 130 ntBASIC5.31□□□□□ -1.56
O00370 AC105031.1-201ENST00000518550 476 ntBASIC5.31□□□□□ -1.56
O00370 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.31□□□□□ -1.56
O00370 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.31□□□□□ -1.56
O00370 AC116553.2-201ENST00000564203 463 ntBASIC5.31□□□□□ -1.56
O00370 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.31□□□□□ -1.56
O00370 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.31□□□□□ -1.56
O00370 MIR4443-201ENST00000585052 53 ntBASIC5.31□□□□□ -1.56
O00370 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.31□□□□□ -1.56
O00370 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 AC105105.5-201ENST00000622635 1294 ntBASIC5.31□□□□□ -1.56
O00370 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
O00370 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.31□□□□□ -1.56
O00370 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.31□□□□□ -1.56
O00370 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.31□□□□□ -1.56
O00370 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.31□□□□□ -1.56
O00370 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
O00370 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
O00370 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.31□□□□□ -1.56
O00370 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
O00370 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
O00370 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.3□□□□□ -1.56
O00370 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
O00370 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.3□□□□□ -1.56
O00370 CASC19-281ENST00000642118 1554 ntBASIC5.3□□□□□ -1.56
O00370 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.3□□□□□ -1.56
O00370 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
O00370 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
O00370 AL589826.1-201ENST00000340697 249 ntBASIC5.3□□□□□ -1.56
O00370 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
O00370 RNU6-618P-201ENST00000363518 112 ntBASIC5.3□□□□□ -1.56
O00370 MIR105-2-201ENST00000385083 81 ntBASIC5.3□□□□□ -1.56
O00370 AC016769.2-201ENST00000414815 475 ntBASIC5.3□□□□□ -1.56
O00370 AC093162.1-201ENST00000419682 124 ntBASIC5.3□□□□□ -1.56
O00370 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.3□□□□□ -1.56
O00370 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
O00370 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.3□□□□□ -1.56
O00370 TPRKBP1-201ENST00000456243 481 ntBASIC5.3□□□□□ -1.56
O00370 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.3□□□□□ -1.56
O00370 OR5M14P-201ENST00000506803 618 ntBASIC5.3□□□□□ -1.56
O00370 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.3□□□□□ -1.56
O00370 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.3□□□□□ -1.56
O00370 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.3□□□□□ -1.56
O00370 AC109635.6-201ENST00000525487 1113 ntBASIC5.3□□□□□ -1.56
O00370 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.3□□□□□ -1.56
O00370 EIF1P5-201ENST00000585002 234 ntBASIC5.3□□□□□ -1.56
O00370 AC119501.1-201ENST00000603646 475 ntBASIC5.3□□□□□ -1.56
O00370 AC005377.1-201ENST00000605126 456 ntBASIC5.3□□□□□ -1.56
O00370 AL162574.2-201ENST00000614618 657 ntBASIC5.3□□□□□ -1.56
O00370 AC015722.2-201ENST00000622210 551 ntBASIC5.3□□□□□ -1.56
O00370 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.3□□□□□ -1.56
O00370 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.3□□□□□ -1.56
O00370 AC027228.2-201ENST00000567141 2154 ntBASIC5.3□□□□□ -1.56
O00370 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.3□□□□□ -1.56
O00370 AC097461.1-201ENST00000568928 2821 ntBASIC5.3□□□□□ -1.56
O00370 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.3□□□□□ -1.56
O00370 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
O00370 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
O00370 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.3□□□□□ -1.56
O00370 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.3□□□□□ -1.56
O00370 MUC2-202ENST00000613187 4845 ntBASIC5.3□□□□□ -1.56
O00370 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.29□□□□□ -1.56
O00370 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms