Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC188H7C350 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC188H7C350 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC188H7C350 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC188H7C350 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC188H7C350 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC188H7C350 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC188H7C350 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC188H7C350 SNORA67-201ENST00000384423 137 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 RNA5SP284-201ENST00000384547 118 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 U3.35-201ENST00000408405 208 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 RGS17P1-201ENST00000423358 553 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 CYCSP6-201ENST00000434498 302 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 CYCSP12-201ENST00000437729 300 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC188H7C350 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 MTCO3P43-201ENST00000440974 771 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC188H7C350 AL354714.3-201ENST00000447284 493 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC188H7C350 AC096741.1-201ENST00000472250 846 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 AC007998.1-201ENST00000474156 672 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 AC037198.2-201ENST00000478845 733 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 SNORD46.2-201ENST00000516021 102 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CCDC188H7C350 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC188H7C350 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC188H7C350 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC188H7C350 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC188H7C350 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 AC023813.4-201ENST00000607580 580 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC188H7C350 AC135803.1-201ENST00000608748 565 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 AL096803.3-201ENST00000609032 532 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 AL049794.2-201ENST00000616301 365 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 RPL23AP61-201ENST00000623642 466 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 SCN1A-220ENST00000641603 12506 ntBASIC5.17□□□□□ -1.58
CCDC188H7C350 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC188H7C350 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCDC188H7C350 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC188H7C350 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC188H7C350 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 AC027279.1-201ENST00000568885 4284 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC188H7C350 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 SPATA2P1-201ENST00000431223 2055 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 SNORD115-48-201ENST00000364764 76 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC188H7C350 SNORA66-201ENST00000384792 133 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC188H7C350 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC188H7C350 RN7SKP199-201ENST00000410325 305 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC188H7C350 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC188H7C350 RPS27P18-201ENST00000431701 247 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 MTND2P2-201ENST00000434633 945 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 CYCSP11-201ENST00000436426 315 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 RPS15AP29-201ENST00000445539 400 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC188H7C350 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC188H7C350 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC188H7C350 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC188H7C350 RPL37AP8-201ENST00000494116 276 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC188H7C350 CDH12P2-201ENST00000504393 298 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC188H7C350 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC188H7C350 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC188H7C350 RPS27AP18-201ENST00000515536 459 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 RNU6-1308P-201ENST00000516817 103 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 HIGD1AP18-201ENST00000520730 278 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC188H7C350 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms