Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU6-1308P-201ENST00000516817 103 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 SEPT10P1-201ENST00000517342 1162 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 OR8X1P-201ENST00000534542 869 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC018552.1-201ENST00000562099 811 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AL022394.1-201ENST00000606979 292 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 EIF3FP1-201ENST00000613970 806 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AL353662.3-201ENST00000625131 237 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AL359715.4-201ENST00000606629 1436 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 SNORA48.4-201ENST00000391089 134 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 RNA5SP241-201ENST00000391326 114 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 CHMP1B2P-201ENST00000399581 597 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AL139128.1-201ENST00000413921 941 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 OR51A6P-201ENST00000418680 1004 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC023141.6-201ENST00000429418 337 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC006326.1-201ENST00000445465 787 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC092647.2-201ENST00000452998 253 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 HAUS1P1-201ENST00000505275 832 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AP001922.4-201ENST00000526967 290 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC004923.2-201ENST00000529649 369 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 RN7SL290P-201ENST00000578661 300 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC011447.4-201ENST00000587562 111 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC015849.2-201ENST00000605738 409 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AP006248.3-201ENST00000623580 594 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AP001784.1-201ENST00000624107 428 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AL606537.1-201ENST00000607258 2011 ntBASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPIPA3F8WFD2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 OR1L6-202ENST00000373684 1044 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 RNU6-244P-201ENST00000391028 104 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 OR8V1P-201ENST00000395193 873 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 OR6K4P-201ENST00000423179 955 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms