Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 AC018695.5-201ENST00000605872 315 ntBASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD8-MDP1E9PL57 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.03□□□□□ -1.61
NEDD8-MDP1E9PL57 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 RNA5SP505-201ENST00000364748 108 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC002524.1-201ENST00000411687 547 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 NPM1P40-201ENST00000412758 733 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC096644.3-201ENST00000416788 338 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 NRBF2P3-201ENST00000432731 865 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC011753.3-201ENST00000443436 406 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 RAD1P2-201ENST00000446414 663 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 OR11I1P-201ENST00000486033 954 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC011005.3-201ENST00000491624 395 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC092593.2-201ENST00000513866 913 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 SOX5P1-201ENST00000524155 1127 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC234771.5-201ENST00000600161 514 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC011453.2-201ENST00000603737 729 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AC100814.1-201ENST00000606963 623 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 OR7M1P-201ENST00000608946 533 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 MIR7703-201ENST00000620784 77 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 AP000346.3-201ENST00000622821 210 ntBASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEDD8-MDP1E9PL57 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC010132.2-201ENST00000295493 1043 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 RNU6-1331P-201ENST00000363658 106 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 MIR298-201ENST00000401212 88 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 RPS4XP9-201ENST00000405151 780 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC119751.6-201ENST00000416712 186 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC073052.1-201ENST00000440417 714 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC000111.2-201ENST00000448200 210 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 RPS17P2-201ENST00000461663 408 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 RN7SL459P-201ENST00000481078 302 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC016687.1-201ENST00000482574 353 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC093890.1-201ENST00000502554 540 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 LSM3P2-201ENST00000551246 273 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AL390334.1-201ENST00000556395 450 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC245128.3-201ENST00000594721 748 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 AC007497.1-201ENST00000610421 561 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 FAM27B-201ENST00000610601 213 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 MIR6780A-201ENST00000615089 68 ntBASIC5.01□□□□□ -1.61
NEDD8-MDP1E9PL57 CR381572.2-201ENST00000624852 397 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms