Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 RPL23P2-201ENST00000320371 421 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 MIR223-201ENST00000385204 110 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 RPL21P108-201ENST00000413857 481 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 RPL21P43-201ENST00000425440 472 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC074386.1-201ENST00000476560 767 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC091544.1-201ENST00000484702 348 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 HMGB3P14-201ENST00000494195 599 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC091868.1-201ENST00000508746 304 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 RNA5SP446-201ENST00000515955 82 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 BUD31P1-201ENST00000521828 359 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC007066.2-202ENST00000566531 914 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC027455.1-201ENST00000574104 594 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 SLC25A36P1-201ENST00000590111 465 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 LINC01739-205ENST00000641890 573 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 AL513548.1-201ENST00000562904 1724 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 MTCO1P46-201ENST00000451639 1491 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AL589647.1-201ENST00000402485 466 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC114755.2-201ENST00000413520 361 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AL358176.3-201ENST00000420757 454 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 BX510359.3-201ENST00000422168 306 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC005033.1-201ENST00000428904 813 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 CNOT7P2-201ENST00000441051 832 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC079168.2-201ENST00000453977 416 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 RPL21P6-201ENST00000479171 504 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 OR11I1P-201ENST00000486033 954 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 RN7SL629P-201ENST00000489622 285 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC025164.1-201ENST00000496249 478 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 HIGD1AP14-201ENST00000507617 282 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 MORF4L1P3-201ENST00000525966 950 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AC073137.1-201ENST00000605636 634 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 AL121890.2-201ENST00000617644 465 ntBASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM49D1C9J1S8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 CR788268.1-201ENST00000603931 1809 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 RBPJP2-201ENST00000618187 1444 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 MAPK10-286ENST00000641208 8747 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 HMGB3P7-201ENST00000400214 611 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 RNA5SP146-201ENST00000410743 123 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 OR51B3P-201ENST00000412287 913 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AC092447.2-201ENST00000435487 669 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AC010733.1-201ENST00000451515 401 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AP000942.1-201ENST00000463969 747 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 RN7SL41P-201ENST00000476144 297 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 RN7SL30P-201ENST00000488416 306 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 RPS4XP14-201ENST00000493072 781 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 RNU1-6P-201ENST00000516290 144 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 HMGB1P19-201ENST00000517578 577 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AC006116.3-201ENST00000592968 361 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms