Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 KRT8P17-201ENST00000453110 1448 ntBASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 C2orf69P3-201ENST00000565542 1120 ntBASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 DGCR10-201ENST00000609839 495 ntBASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 AP006587.1-201ENST00000534129 1502 ntBASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA9Q9Y5G4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 AP005242.2-201ENST00000580065 1175 ntBASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA9Q9Y5G4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 PLK5-205ENST00000642079 1969 ntBASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 DUX4L26-201ENST00000489078 1255 ntBASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PCDHGA9Q9Y5G4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGA9Q9Y5G4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.21■□□□□ 0.5
PCDHGA9Q9Y5G4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms