Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.13■□□□□ 0.17
Ube4bQ9ES00 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Gm7514-201ENSMUST00000209475 934 ntBASIC16.12■□□□□ 0.17
Ube4bQ9ES00 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.12■□□□□ 0.17
Ube4bQ9ES00 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ube4bQ9ES00 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Gm18284-201ENSMUST00000172604 624 ntBASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Mir8112-201ENSMUST00000184382 131 ntBASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.1■□□□□ 0.17
Ube4bQ9ES00 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms