Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ssr1Q9CY50 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssr1Q9CY50 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssr1Q9CY50 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssr1Q9CY50 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssr1Q9CY50 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssr1Q9CY50 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms