Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 AC091304.2-201ENST00000564639 760 ntBASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 BX842568.4-201ENST00000421222 227 ntBASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 AC005104.2-201ENST00000427818 678 ntBASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 AC023632.3-201ENST00000521633 145 ntBASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 LINC01711-201ENST00000598340 967 ntBASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3BQ96NU0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 KRT18P58-201ENST00000527480 1120 ntBASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 MIR3197-201ENST00000582241 73 ntBASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 AC242852.2-201ENST00000615738 1807 ntBASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3BQ96NU0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 C1QL1P1-201ENST00000568105 661 ntBASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 AC131212.4-201ENST00000623606 975 ntBASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3BQ96NU0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 AC140113.2-201ENST00000604370 208 ntBASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms