Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 NEK4P2-201ENST00000580004 1012 ntBASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 KRT8P10-201ENST00000450021 1447 ntBASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 KRT17P6-201ENST00000453795 1220 ntBASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 AC092329.2-201ENST00000598402 547 ntBASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM43Q96BQ3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 KRT8P41-201ENST00000533985 1514 ntBASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 FBXW4P1-201ENST00000426721 2239 ntBASIC21.23■□□□□ 0.99
TRIM43Q96BQ3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 AC004870.1-201ENST00000315132 882 ntBASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM43Q96BQ3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 AC111152.3-201ENST00000569699 673 ntBASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 GPALPP1-207ENST00000611650 899 ntBASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM43Q96BQ3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.2■□□□□ 0.99
TRIM43Q96BQ3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 HBZP1-201ENST00000354915 429 ntBASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms