Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RNFT1Q5M7Z0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNFT1Q5M7Z0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 FAM207BP-201ENST00000447172 505 ntBASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 AC104076.2-201ENST00000448912 469 ntBASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 FAM87A-204ENST00000613235 858 ntBASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 GABARAPL3-202ENST00000624044 1851 ntBASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNFT1Q5M7Z0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 MFAP1P1-201ENST00000442257 1255 ntBASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNFT1Q5M7Z0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 AC096733.2-201ENST00000609937 1394 ntBASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 AL160286.2-201ENST00000567150 934 ntBASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNFT1Q5M7Z0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 AC009237.14-201ENST00000609975 1594 ntBASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 ARMC10P1-201ENST00000313754 855 ntBASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 AL590326.2-201ENST00000625139 305 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms