Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PAX9P55771 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.65■□□□□ 0.1
PAX9P55771 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 PCDHB18P-201ENST00000524813 2368 ntBASIC15.65■□□□□ 0.1
PAX9P55771 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PAX9P55771 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PAX9P55771 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 Z98044.1-201ENST00000632503 1764 ntBASIC15.65■□□□□ 0.1
PAX9P55771 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
PAX9P55771 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PAX9P55771 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.65■□□□□ 0.1
PAX9P55771 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PAX9P55771 AC123595.1-201ENST00000440769 1046 ntBASIC15.65■□□□□ 0.1
PAX9P55771 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.65■□□□□ 0.1
PAX9P55771 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.65■□□□□ 0.1
PAX9P55771 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.65■□□□□ 0.1
PAX9P55771 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.65■□□□□ 0.1
PAX9P55771 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.65■□□□□ 0.1
PAX9P55771 AL354751.1-201ENST00000412768 1863 ntBASIC15.65■□□□□ 0.1
PAX9P55771 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PAX9P55771 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
PAX9P55771 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.64■□□□□ 0.09
PAX9P55771 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PAX9P55771 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PAX9P55771 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.64■□□□□ 0.09
PAX9P55771 TERF1P5-201ENST00000477545 1207 ntBASIC15.64■□□□□ 0.09
PAX9P55771 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PAX9P55771 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.64■□□□□ 0.09
PAX9P55771 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.64■□□□□ 0.09
PAX9P55771 MYCNOS-205ENST00000641950 531 ntBASIC15.64■□□□□ 0.09
PAX9P55771 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.64■□□□□ 0.09
PAX9P55771 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.64■□□□□ 0.09
PAX9P55771 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.64■□□□□ 0.09
PAX9P55771 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
PAX9P55771 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
PAX9P55771 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PAX9P55771 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PAX9P55771 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PAX9P55771 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.63■□□□□ 0.09
PAX9P55771 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.63■□□□□ 0.09
PAX9P55771 AL162412.1-201ENST00000567129 965 ntBASIC15.63■□□□□ 0.09
PAX9P55771 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.63■□□□□ 0.09
PAX9P55771 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PAX9P55771 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.63■□□□□ 0.09
PAX9P55771 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.63■□□□□ 0.09
PAX9P55771 NOC2LP1-202ENST00000452600 2235 ntBASIC15.63■□□□□ 0.09
PAX9P55771 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PAX9P55771 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms