Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC9A3P48764 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC9A3P48764 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC9A3P48764 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.85■□□□□ 0.45
SLC9A3P48764 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.85■□□□□ 0.45
SLC9A3P48764 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC9A3P48764 NEFHP1-201ENST00000412845 2629 ntBASIC17.85■□□□□ 0.45
SLC9A3P48764 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.84■□□□□ 0.45
SLC9A3P48764 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC9A3P48764 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC9A3P48764 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC9A3P48764 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC9A3P48764 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC9A3P48764 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.83■□□□□ 0.45
SLC9A3P48764 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.83■□□□□ 0.45
SLC9A3P48764 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SLC9A3P48764 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC9A3P48764 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC9A3P48764 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SLC9A3P48764 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SLC9A3P48764 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC9A3P48764 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC9A3P48764 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC9A3P48764 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC9A3P48764 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC9A3P48764 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
SLC9A3P48764 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SLC9A3P48764 Z82202.1-201ENST00000623446 1880 ntBASIC17.83■□□□□ 0.44
SLC9A3P48764 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC9A3P48764 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC9A3P48764 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SLC9A3P48764 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC9A3P48764 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC9A3P48764 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC9A3P48764 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SLC9A3P48764 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC9A3P48764 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC9A3P48764 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC9A3P48764 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 AC020763.4-201ENST00000623414 4170 ntBASIC17.82■□□□□ 0.44
SLC9A3P48764 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC9A3P48764 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLC9A3P48764 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC9A3P48764 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC9A3P48764 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC9A3P48764 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 AC080038.1-201ENST00000611274 1154 ntBASIC17.82■□□□□ 0.44
SLC9A3P48764 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC9A3P48764 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC9A3P48764 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC9A3P48764 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SLC9A3P48764 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLC9A3P48764 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC9A3P48764 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC9A3P48764 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms