Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 AC087499.1-201ENST00000418141 1075 ntBASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 AC116562.2-201ENST00000507042 360 ntBASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 AC131212.4-201ENST00000623606 975 ntBASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SRGAP2CP0DJJ0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 AC079598.2-202ENST00000546624 1451 ntBASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 UNC93B2-201ENST00000285383 730 ntBASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 AC004980.1-204ENST00000429707 299 ntBASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 AP000525.1-201ENST00000608286 694 ntBASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP2CP0DJJ0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SRGAP2CP0DJJ0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.45■■□□□ 1.03
SRGAP2CP0DJJ0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SRGAP2CP0DJJ0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.45■■□□□ 1.03
SRGAP2CP0DJJ0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP2CP0DJJ0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 MMP23A-201ENST00000234610 1017 ntBASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 AC011506.1-201ENST00000474329 610 ntBASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 AC133561.5-201ENST00000635547 218 ntBASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRGAP2CP0DJJ0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms