Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GFRA3O60609 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.02■□□□□ 0.64
GFRA3O60609 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GFRA3O60609 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GFRA3O60609 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GFRA3O60609 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GFRA3O60609 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GFRA3O60609 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GFRA3O60609 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.02■□□□□ 0.64
GFRA3O60609 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.02■□□□□ 0.64
GFRA3O60609 AC098831.1-202ENST00000438821 336 ntBASIC19.02■□□□□ 0.64
GFRA3O60609 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.02■□□□□ 0.64
GFRA3O60609 AC104819.1-201ENST00000504587 486 ntBASIC19.02■□□□□ 0.64
GFRA3O60609 PGAM5P1-201ENST00000518923 814 ntBASIC19.02■□□□□ 0.64
GFRA3O60609 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.02■□□□□ 0.64
GFRA3O60609 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.02■□□□□ 0.64
GFRA3O60609 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.02■□□□□ 0.64
GFRA3O60609 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
GFRA3O60609 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.02■□□□□ 0.64
GFRA3O60609 AP001160.2-201ENST00000596071 487 ntBASIC19.02■□□□□ 0.64
GFRA3O60609 AL390719.2-201ENST00000606993 987 ntBASIC19.02■□□□□ 0.64
GFRA3O60609 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.02■□□□□ 0.64
GFRA3O60609 MIR2861-201ENST00000636310 90 ntBASIC19.02■□□□□ 0.64
GFRA3O60609 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GFRA3O60609 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.02■□□□□ 0.63
GFRA3O60609 TFP1-202ENST00000475455 1573 ntBASIC19.02■□□□□ 0.63
GFRA3O60609 AC116351.2-201ENST00000606540 1585 ntBASIC19.02■□□□□ 0.63
GFRA3O60609 AC093525.10-201ENST00000625130 1569 ntBASIC19.02■□□□□ 0.63
GFRA3O60609 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GFRA3O60609 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GFRA3O60609 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GFRA3O60609 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.01■□□□□ 0.63
GFRA3O60609 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.01■□□□□ 0.63
GFRA3O60609 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.01■□□□□ 0.63
GFRA3O60609 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
GFRA3O60609 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.01■□□□□ 0.63
GFRA3O60609 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GFRA3O60609 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GFRA3O60609 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GFRA3O60609 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GFRA3O60609 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GFRA3O60609 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
GFRA3O60609 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GFRA3O60609 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GFRA3O60609 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.01■□□□□ 0.63
GFRA3O60609 AL162741.1-201ENST00000565563 1558 ntBASIC19.01■□□□□ 0.63
GFRA3O60609 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GFRA3O60609 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GFRA3O60609 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
GFRA3O60609 AC011484.1-201ENST00000377652 1995 ntBASIC19.01■□□□□ 0.63
GFRA3O60609 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19■□□□□ 0.63
GFRA3O60609 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19■□□□□ 0.63
GFRA3O60609 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GFRA3O60609 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GFRA3O60609 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19■□□□□ 0.63
GFRA3O60609 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GFRA3O60609 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19■□□□□ 0.63
GFRA3O60609 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19■□□□□ 0.63
GFRA3O60609 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19■□□□□ 0.63
GFRA3O60609 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19■□□□□ 0.63
GFRA3O60609 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19■□□□□ 0.63
GFRA3O60609 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19■□□□□ 0.63
GFRA3O60609 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19■□□□□ 0.63
GFRA3O60609 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
GFRA3O60609 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GFRA3O60609 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19■□□□□ 0.63
GFRA3O60609 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GFRA3O60609 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
GFRA3O60609 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19■□□□□ 0.63
GFRA3O60609 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GFRA3O60609 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GFRA3O60609 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.99■□□□□ 0.63
GFRA3O60609 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GFRA3O60609 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GFRA3O60609 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GFRA3O60609 TSPY22P-201ENST00000427496 604 ntBASIC18.99■□□□□ 0.63
GFRA3O60609 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GFRA3O60609 SAPCD2P3-201ENST00000455031 850 ntBASIC18.99■□□□□ 0.63
GFRA3O60609 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
GFRA3O60609 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.99■□□□□ 0.63
GFRA3O60609 AC239800.4-201ENST00000603712 296 ntBASIC18.99■□□□□ 0.63
GFRA3O60609 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.99■□□□□ 0.63
GFRA3O60609 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GFRA3O60609 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GFRA3O60609 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GFRA3O60609 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.99■□□□□ 0.63
GFRA3O60609 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.98■□□□□ 0.63
GFRA3O60609 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
GFRA3O60609 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GFRA3O60609 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GFRA3O60609 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GFRA3O60609 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GFRA3O60609 AKR1C7P-201ENST00000305623 895 ntBASIC18.98■□□□□ 0.63
GFRA3O60609 RPS8P6-201ENST00000426177 609 ntBASIC18.98■□□□□ 0.63
GFRA3O60609 AC093909.1-201ENST00000504731 1122 ntBASIC18.98■□□□□ 0.63
GFRA3O60609 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.98■□□□□ 0.63
GFRA3O60609 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GFRA3O60609 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms