Protein–RNA interactions for Protein: A7E2V4

ZSWIM8, Zinc finger SWIM domain-containing protein 8, humanhuman

Predictions only

Length 1,837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8A7E2V4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZSWIM8A7E2V4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZSWIM8A7E2V4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.24■■□□□ 1.15
ZSWIM8A7E2V4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 AL136038.3-201ENST00000561909 1096 ntBASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 IFNL4P1-201ENST00000607083 540 ntBASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZSWIM8A7E2V4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 AL691432.3-201ENST00000621860 400 ntBASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 TMEM179-206ENST00000616017 1645 ntBASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 STARP1-201ENST00000397973 869 ntBASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 LINC01465-201ENST00000408887 1940 ntBASIC22.22■■□□□ 1.15
ZSWIM8A7E2V4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
ZSWIM8A7E2V4 PLK5-205ENST00000642079 1969 ntBASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 CA15P1-201ENST00000481698 905 ntBASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 AC004263.2-201ENST00000617183 678 ntBASIC22.2■■□□□ 1.14
ZSWIM8A7E2V4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZSWIM8A7E2V4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms