Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 AC006557.6-201ENST00000623071 864 ntBASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 NFIC-211ENST00000641145 8399 ntBASIC14.02□□□□□ -0.17
TRGV4A0A0C4DH28 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 AL355802.2-201ENST00000402069 882 ntBASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 AC104771.1-201ENST00000603335 964 ntBASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV4A0A0C4DH28 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 AC069152.1-201ENST00000438030 544 ntBASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 HLA-B-256ENST00000639848 1089 ntBASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV4A0A0C4DH28 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRGV4A0A0C4DH28 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
TRGV4A0A0C4DH28 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms