Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
H2afb3S4R1G7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.04■□□□□ 0.96
H2afb3S4R1G7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
H2afb3S4R1G7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
H2afb3S4R1G7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb3S4R1G7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb3S4R1G7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afb3S4R1G7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afb3S4R1G7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
H2afb3S4R1G7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb3S4R1G7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb3S4R1G7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.01■□□□□ 0.95
H2afb3S4R1G7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb3S4R1G7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afb3S4R1G7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb3S4R1G7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
H2afb3S4R1G7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb3S4R1G7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb3S4R1G7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb3S4R1G7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb3S4R1G7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afb3S4R1G7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb3S4R1G7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb3S4R1G7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb3S4R1G7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afb3S4R1G7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afb3S4R1G7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb3S4R1G7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb3S4R1G7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
H2afb3S4R1G7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb3S4R1G7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb3S4R1G7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.95■□□□□ 0.94
H2afb3S4R1G7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb3S4R1G7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.94■□□□□ 0.94
H2afb3S4R1G7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb3S4R1G7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.93■□□□□ 0.94
H2afb3S4R1G7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb3S4R1G7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
H2afb3S4R1G7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb3S4R1G7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb3S4R1G7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.92■□□□□ 0.94
H2afb3S4R1G7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
H2afb3S4R1G7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
H2afb3S4R1G7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
H2afb3S4R1G7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb3S4R1G7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb3S4R1G7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb3S4R1G7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
H2afb3S4R1G7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb3S4R1G7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb3S4R1G7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb3S4R1G7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb3S4R1G7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb3S4R1G7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb3S4R1G7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb3S4R1G7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb3S4R1G7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb3S4R1G7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb3S4R1G7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb3S4R1G7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb3S4R1G7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.87■□□□□ 0.93
H2afb3S4R1G7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb3S4R1G7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb3S4R1G7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb3S4R1G7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb3S4R1G7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.86■□□□□ 0.93
H2afb3S4R1G7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
H2afb3S4R1G7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
H2afb3S4R1G7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
H2afb3S4R1G7 Gm30023-201ENSMUST00000197970 889 ntBASIC20.85■□□□□ 0.93
H2afb3S4R1G7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb3S4R1G7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb3S4R1G7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb3S4R1G7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb3S4R1G7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
H2afb3S4R1G7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
H2afb3S4R1G7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
H2afb3S4R1G7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb3S4R1G7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb3S4R1G7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb3S4R1G7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb3S4R1G7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb3S4R1G7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb3S4R1G7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb3S4R1G7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb3S4R1G7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb3S4R1G7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb3S4R1G7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb3S4R1G7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb3S4R1G7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.8■□□□□ 0.92
H2afb3S4R1G7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb3S4R1G7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afb3S4R1G7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb3S4R1G7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb3S4R1G7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb3S4R1G7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb3S4R1G7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb3S4R1G7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afb3S4R1G7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afb3S4R1G7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms