Protein–RNA interactions for Protein: Q9EQ52

Vmn1r48, Vomeronasal type-1 receptor 48, mousemouse

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r48Q9EQ52 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r48Q9EQ52 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r48Q9EQ52 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Vmn1r48Q9EQ52 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.24■□□□□ 0.83
Vmn1r48Q9EQ52 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r48Q9EQ52 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vmn1r48Q9EQ52 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r48Q9EQ52 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r48Q9EQ52 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r48Q9EQ52 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r48Q9EQ52 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r48Q9EQ52 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r48Q9EQ52 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r48Q9EQ52 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.22■□□□□ 0.83
Vmn1r48Q9EQ52 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vmn1r48Q9EQ52 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r48Q9EQ52 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r48Q9EQ52 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r48Q9EQ52 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r48Q9EQ52 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r48Q9EQ52 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.21■□□□□ 0.83
Vmn1r48Q9EQ52 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r48Q9EQ52 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r48Q9EQ52 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r48Q9EQ52 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r48Q9EQ52 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Vmn1r48Q9EQ52 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Vmn1r48Q9EQ52 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r48Q9EQ52 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Vmn1r48Q9EQ52 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r48Q9EQ52 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r48Q9EQ52 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r48Q9EQ52 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r48Q9EQ52 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Vmn1r48Q9EQ52 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r48Q9EQ52 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Vmn1r48Q9EQ52 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vmn1r48Q9EQ52 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Vmn1r48Q9EQ52 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r48Q9EQ52 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Vmn1r48Q9EQ52 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.14■□□□□ 0.81
Vmn1r48Q9EQ52 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r48Q9EQ52 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r48Q9EQ52 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r48Q9EQ52 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r48Q9EQ52 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r48Q9EQ52 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Vmn1r48Q9EQ52 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r48Q9EQ52 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r48Q9EQ52 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r48Q9EQ52 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r48Q9EQ52 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r48Q9EQ52 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r48Q9EQ52 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Vmn1r48Q9EQ52 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r48Q9EQ52 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Vmn1r48Q9EQ52 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r48Q9EQ52 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r48Q9EQ52 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.1■□□□□ 0.81
Vmn1r48Q9EQ52 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r48Q9EQ52 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.09■□□□□ 0.81
Vmn1r48Q9EQ52 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r48Q9EQ52 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r48Q9EQ52 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r48Q9EQ52 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r48Q9EQ52 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r48Q9EQ52 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r48Q9EQ52 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Vmn1r48Q9EQ52 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r48Q9EQ52 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r48Q9EQ52 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r48Q9EQ52 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Vmn1r48Q9EQ52 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vmn1r48Q9EQ52 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Vmn1r48Q9EQ52 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vmn1r48Q9EQ52 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vmn1r48Q9EQ52 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Vmn1r48Q9EQ52 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r48Q9EQ52 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r48Q9EQ52 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.06■□□□□ 0.8
Vmn1r48Q9EQ52 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r48Q9EQ52 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Vmn1r48Q9EQ52 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.06■□□□□ 0.8
Vmn1r48Q9EQ52 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r48Q9EQ52 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Vmn1r48Q9EQ52 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r48Q9EQ52 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r48Q9EQ52 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.03■□□□□ 0.8
Vmn1r48Q9EQ52 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r48Q9EQ52 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r48Q9EQ52 Gm26115-201ENSMUST00000175605 87 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 217.4 ms