Protein–RNA interactions for Protein: Q9D6G3

2900055J20Rik, RIKEN cDNA 2900055J20 gene, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2900055J20RikQ9D6G3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
2900055J20RikQ9D6G3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
2900055J20RikQ9D6G3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
2900055J20RikQ9D6G3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
2900055J20RikQ9D6G3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
2900055J20RikQ9D6G3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
2900055J20RikQ9D6G3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
2900055J20RikQ9D6G3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
2900055J20RikQ9D6G3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
2900055J20RikQ9D6G3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
2900055J20RikQ9D6G3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
2900055J20RikQ9D6G3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
2900055J20RikQ9D6G3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
2900055J20RikQ9D6G3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
2900055J20RikQ9D6G3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
2900055J20RikQ9D6G3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
2900055J20RikQ9D6G3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
2900055J20RikQ9D6G3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
2900055J20RikQ9D6G3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.24■□□□□ 0.67
2900055J20RikQ9D6G3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
2900055J20RikQ9D6G3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
2900055J20RikQ9D6G3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
2900055J20RikQ9D6G3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
2900055J20RikQ9D6G3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
2900055J20RikQ9D6G3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
2900055J20RikQ9D6G3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
2900055J20RikQ9D6G3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
2900055J20RikQ9D6G3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
2900055J20RikQ9D6G3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.21■□□□□ 0.67
2900055J20RikQ9D6G3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
2900055J20RikQ9D6G3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
2900055J20RikQ9D6G3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
2900055J20RikQ9D6G3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
2900055J20RikQ9D6G3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
2900055J20RikQ9D6G3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
2900055J20RikQ9D6G3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
2900055J20RikQ9D6G3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
2900055J20RikQ9D6G3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.17■□□□□ 0.66
2900055J20RikQ9D6G3 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.17■□□□□ 0.66
2900055J20RikQ9D6G3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
2900055J20RikQ9D6G3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
2900055J20RikQ9D6G3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
2900055J20RikQ9D6G3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
2900055J20RikQ9D6G3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
2900055J20RikQ9D6G3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
2900055J20RikQ9D6G3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
2900055J20RikQ9D6G3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
2900055J20RikQ9D6G3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
2900055J20RikQ9D6G3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.15■□□□□ 0.66
2900055J20RikQ9D6G3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
2900055J20RikQ9D6G3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
2900055J20RikQ9D6G3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
2900055J20RikQ9D6G3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
2900055J20RikQ9D6G3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
2900055J20RikQ9D6G3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
2900055J20RikQ9D6G3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
2900055J20RikQ9D6G3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.13■□□□□ 0.65
2900055J20RikQ9D6G3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.13■□□□□ 0.65
2900055J20RikQ9D6G3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
2900055J20RikQ9D6G3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
2900055J20RikQ9D6G3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
2900055J20RikQ9D6G3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
2900055J20RikQ9D6G3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
2900055J20RikQ9D6G3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
2900055J20RikQ9D6G3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
2900055J20RikQ9D6G3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
2900055J20RikQ9D6G3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
2900055J20RikQ9D6G3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
2900055J20RikQ9D6G3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
2900055J20RikQ9D6G3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
2900055J20RikQ9D6G3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
2900055J20RikQ9D6G3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
2900055J20RikQ9D6G3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
2900055J20RikQ9D6G3 Gm24804-201ENSMUST00000174982 85 ntBASIC19.1■□□□□ 0.65
2900055J20RikQ9D6G3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
2900055J20RikQ9D6G3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
2900055J20RikQ9D6G3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.09■□□□□ 0.65
2900055J20RikQ9D6G3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
2900055J20RikQ9D6G3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
2900055J20RikQ9D6G3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
2900055J20RikQ9D6G3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
2900055J20RikQ9D6G3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
2900055J20RikQ9D6G3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.08■□□□□ 0.64
2900055J20RikQ9D6G3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
2900055J20RikQ9D6G3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
2900055J20RikQ9D6G3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
2900055J20RikQ9D6G3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
2900055J20RikQ9D6G3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
2900055J20RikQ9D6G3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
2900055J20RikQ9D6G3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms