Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
5530400C23RikQ9D3I0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
5530400C23RikQ9D3I0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
5530400C23RikQ9D3I0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
5530400C23RikQ9D3I0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.09■■□□□ 1.29
5530400C23RikQ9D3I0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
5530400C23RikQ9D3I0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
5530400C23RikQ9D3I0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
5530400C23RikQ9D3I0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
5530400C23RikQ9D3I0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.06■■□□□ 1.28
5530400C23RikQ9D3I0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
5530400C23RikQ9D3I0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.06■■□□□ 1.28
5530400C23RikQ9D3I0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.06■■□□□ 1.28
5530400C23RikQ9D3I0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
5530400C23RikQ9D3I0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
5530400C23RikQ9D3I0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.05■■□□□ 1.28
5530400C23RikQ9D3I0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
5530400C23RikQ9D3I0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
5530400C23RikQ9D3I0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
5530400C23RikQ9D3I0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
5530400C23RikQ9D3I0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
5530400C23RikQ9D3I0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.04■■□□□ 1.28
5530400C23RikQ9D3I0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
5530400C23RikQ9D3I0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
5530400C23RikQ9D3I0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
5530400C23RikQ9D3I0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
5530400C23RikQ9D3I0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
5530400C23RikQ9D3I0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.03■■□□□ 1.28
5530400C23RikQ9D3I0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
5530400C23RikQ9D3I0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
5530400C23RikQ9D3I0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
5530400C23RikQ9D3I0 Gm8503-201ENSMUST00000118131 455 ntBASIC23.01■■□□□ 1.27
5530400C23RikQ9D3I0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.01■■□□□ 1.27
5530400C23RikQ9D3I0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.01■■□□□ 1.27
5530400C23RikQ9D3I0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
5530400C23RikQ9D3I0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
5530400C23RikQ9D3I0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
5530400C23RikQ9D3I0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23■■□□□ 1.27
5530400C23RikQ9D3I0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
5530400C23RikQ9D3I0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
5530400C23RikQ9D3I0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
5530400C23RikQ9D3I0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
5530400C23RikQ9D3I0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
5530400C23RikQ9D3I0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
5530400C23RikQ9D3I0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.97■■□□□ 1.27
5530400C23RikQ9D3I0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.97■■□□□ 1.27
5530400C23RikQ9D3I0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
5530400C23RikQ9D3I0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
5530400C23RikQ9D3I0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
5530400C23RikQ9D3I0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
5530400C23RikQ9D3I0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
5530400C23RikQ9D3I0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.93■■□□□ 1.26
5530400C23RikQ9D3I0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
5530400C23RikQ9D3I0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
5530400C23RikQ9D3I0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.92■■□□□ 1.26
5530400C23RikQ9D3I0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
5530400C23RikQ9D3I0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
5530400C23RikQ9D3I0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
5530400C23RikQ9D3I0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
5530400C23RikQ9D3I0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
5530400C23RikQ9D3I0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
5530400C23RikQ9D3I0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.91■■□□□ 1.26
5530400C23RikQ9D3I0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
5530400C23RikQ9D3I0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.9■■□□□ 1.26
5530400C23RikQ9D3I0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
5530400C23RikQ9D3I0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.89■■□□□ 1.25
5530400C23RikQ9D3I0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
5530400C23RikQ9D3I0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
5530400C23RikQ9D3I0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.88■■□□□ 1.25
5530400C23RikQ9D3I0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
5530400C23RikQ9D3I0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
5530400C23RikQ9D3I0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.87■■□□□ 1.25
5530400C23RikQ9D3I0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
5530400C23RikQ9D3I0 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.86■■□□□ 1.25
5530400C23RikQ9D3I0 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.86■■□□□ 1.25
5530400C23RikQ9D3I0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
5530400C23RikQ9D3I0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.85■■□□□ 1.25
5530400C23RikQ9D3I0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
5530400C23RikQ9D3I0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
5530400C23RikQ9D3I0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
5530400C23RikQ9D3I0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
5530400C23RikQ9D3I0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
5530400C23RikQ9D3I0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
5530400C23RikQ9D3I0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
5530400C23RikQ9D3I0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
5530400C23RikQ9D3I0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
5530400C23RikQ9D3I0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
5530400C23RikQ9D3I0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
5530400C23RikQ9D3I0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
5530400C23RikQ9D3I0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
5530400C23RikQ9D3I0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.81■■□□□ 1.24
5530400C23RikQ9D3I0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
5530400C23RikQ9D3I0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
5530400C23RikQ9D3I0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
5530400C23RikQ9D3I0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
5530400C23RikQ9D3I0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
5530400C23RikQ9D3I0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
5530400C23RikQ9D3I0 Particl-201ENSMUST00000205370 1560 ntBASIC22.8■■□□□ 1.24
5530400C23RikQ9D3I0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
5530400C23RikQ9D3I0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms