Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26,62■■□□□ 1,85
Chd1lQ9CXF7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26,61■■□□□ 1,85
Chd1lQ9CXF7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26,6■■□□□ 1,85
Chd1lQ9CXF7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26,6■■□□□ 1,85
Chd1lQ9CXF7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26,6■■□□□ 1,85
Chd1lQ9CXF7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26,6■■□□□ 1,85
Chd1lQ9CXF7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26,6■■□□□ 1,85
Chd1lQ9CXF7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26,59■■□□□ 1,85
Chd1lQ9CXF7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26,59■■□□□ 1,85
Chd1lQ9CXF7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Chd1lQ9CXF7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26,58■■□□□ 1,85
Chd1lQ9CXF7 Gm26115-201ENSMUST00000175605 87 ntBASIC26,58■■□□□ 1,85
Chd1lQ9CXF7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26,58■■□□□ 1,85
Chd1lQ9CXF7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26,58■■□□□ 1,85
Chd1lQ9CXF7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Chd1lQ9CXF7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Chd1lQ9CXF7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26,57■■□□□ 1,84
Chd1lQ9CXF7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26,57■■□□□ 1,84
Chd1lQ9CXF7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Chd1lQ9CXF7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Chd1lQ9CXF7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26,56■■□□□ 1,84
Chd1lQ9CXF7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26,56■■□□□ 1,84
Chd1lQ9CXF7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26,56■■□□□ 1,84
Chd1lQ9CXF7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Chd1lQ9CXF7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Chd1lQ9CXF7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Chd1lQ9CXF7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26,56■■□□□ 1,84
Chd1lQ9CXF7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Chd1lQ9CXF7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26,55■■□□□ 1,84
Chd1lQ9CXF7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Chd1lQ9CXF7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26,54■■□□□ 1,84
Chd1lQ9CXF7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26,54■■□□□ 1,84
Chd1lQ9CXF7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26,54■■□□□ 1,84
Chd1lQ9CXF7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Chd1lQ9CXF7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26,53■■□□□ 1,84
Chd1lQ9CXF7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26,53■■□□□ 1,84
Chd1lQ9CXF7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
Chd1lQ9CXF7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26,52■■□□□ 1,84
Chd1lQ9CXF7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26,52■■□□□ 1,84
Chd1lQ9CXF7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Chd1lQ9CXF7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26,51■■□□□ 1,83
Chd1lQ9CXF7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Chd1lQ9CXF7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC26,5■■□□□ 1,83
Chd1lQ9CXF7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Chd1lQ9CXF7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Chd1lQ9CXF7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Chd1lQ9CXF7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26,49■■□□□ 1,83
Chd1lQ9CXF7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26,49■■□□□ 1,83
Chd1lQ9CXF7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26,49■■□□□ 1,83
Chd1lQ9CXF7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Chd1lQ9CXF7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26,49■■□□□ 1,83
Chd1lQ9CXF7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26,49■■□□□ 1,83
Chd1lQ9CXF7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26,49■■□□□ 1,83
Chd1lQ9CXF7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Chd1lQ9CXF7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26,48■■□□□ 1,83
Chd1lQ9CXF7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Chd1lQ9CXF7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26,48■■□□□ 1,83
Chd1lQ9CXF7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Chd1lQ9CXF7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Chd1lQ9CXF7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26,48■■□□□ 1,83
Chd1lQ9CXF7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Chd1lQ9CXF7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26,47■■□□□ 1,83
Chd1lQ9CXF7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Chd1lQ9CXF7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26,46■■□□□ 1,83
Chd1lQ9CXF7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Chd1lQ9CXF7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Chd1lQ9CXF7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Chd1lQ9CXF7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26,46■■□□□ 1,83
Chd1lQ9CXF7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,82
Chd1lQ9CXF7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,82
Chd1lQ9CXF7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Chd1lQ9CXF7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Chd1lQ9CXF7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Chd1lQ9CXF7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Chd1lQ9CXF7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Chd1lQ9CXF7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Chd1lQ9CXF7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26,43■■□□□ 1,82
Chd1lQ9CXF7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26,43■■□□□ 1,82
Chd1lQ9CXF7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Chd1lQ9CXF7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26,42■■□□□ 1,82
Chd1lQ9CXF7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26,41■■□□□ 1,82
Chd1lQ9CXF7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Chd1lQ9CXF7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Chd1lQ9CXF7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26,41■■□□□ 1,82
Chd1lQ9CXF7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26,41■■□□□ 1,82
Chd1lQ9CXF7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC26,4■■□□□ 1,82
Chd1lQ9CXF7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC26,4■■□□□ 1,82
Chd1lQ9CXF7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Chd1lQ9CXF7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26,39■■□□□ 1,82
Chd1lQ9CXF7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Chd1lQ9CXF7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26,39■■□□□ 1,82
Chd1lQ9CXF7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26,39■■□□□ 1,82
Chd1lQ9CXF7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26,39■■□□□ 1,82
Chd1lQ9CXF7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC26,39■■□□□ 1,82
Chd1lQ9CXF7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
Chd1lQ9CXF7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
Chd1lQ9CXF7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Chd1lQ9CXF7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26,36■■□□□ 1,81
Chd1lQ9CXF7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26,36■■□□□ 1,81
Chd1lQ9CXF7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26,36■■□□□ 1,81
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms