Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdca3Q99M54 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cdca3Q99M54 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdca3Q99M54 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdca3Q99M54 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdca3Q99M54 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdca3Q99M54 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdca3Q99M54 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdca3Q99M54 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cdca3Q99M54 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdca3Q99M54 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdca3Q99M54 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Cdca3Q99M54 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdca3Q99M54 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.64■■□□□ 1.06
Cdca3Q99M54 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdca3Q99M54 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Cdca3Q99M54 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cdca3Q99M54 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdca3Q99M54 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.63■■□□□ 1.05
Cdca3Q99M54 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cdca3Q99M54 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdca3Q99M54 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdca3Q99M54 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdca3Q99M54 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdca3Q99M54 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
Cdca3Q99M54 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdca3Q99M54 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdca3Q99M54 Gm11175-201ENSMUST00000116172 543 ntBASIC21.6■■□□□ 1.05
Cdca3Q99M54 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdca3Q99M54 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdca3Q99M54 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdca3Q99M54 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdca3Q99M54 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdca3Q99M54 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cdca3Q99M54 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdca3Q99M54 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdca3Q99M54 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.58■■□□□ 1.05
Cdca3Q99M54 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.58■■□□□ 1.05
Cdca3Q99M54 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdca3Q99M54 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdca3Q99M54 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cdca3Q99M54 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdca3Q99M54 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cdca3Q99M54 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cdca3Q99M54 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cdca3Q99M54 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
Cdca3Q99M54 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.55■■□□□ 1.04
Cdca3Q99M54 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdca3Q99M54 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cdca3Q99M54 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Cdca3Q99M54 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cdca3Q99M54 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdca3Q99M54 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdca3Q99M54 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdca3Q99M54 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdca3Q99M54 Cap2-205ENSMUST00000225824 1634 ntBASIC21.53■■□□□ 1.04
Cdca3Q99M54 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdca3Q99M54 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdca3Q99M54 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdca3Q99M54 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdca3Q99M54 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.51■■□□□ 1.03
Cdca3Q99M54 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.51■■□□□ 1.03
Cdca3Q99M54 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.51■■□□□ 1.03
Cdca3Q99M54 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdca3Q99M54 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdca3Q99M54 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdca3Q99M54 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdca3Q99M54 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdca3Q99M54 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdca3Q99M54 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cdca3Q99M54 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdca3Q99M54 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.49■■□□□ 1.03
Cdca3Q99M54 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Cdca3Q99M54 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdca3Q99M54 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.48■■□□□ 1.03
Cdca3Q99M54 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdca3Q99M54 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Cdca3Q99M54 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdca3Q99M54 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.48■■□□□ 1.03
Cdca3Q99M54 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Cdca3Q99M54 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdca3Q99M54 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.47■■□□□ 1.03
Cdca3Q99M54 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Cdca3Q99M54 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Cdca3Q99M54 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Cdca3Q99M54 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdca3Q99M54 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.44■■□□□ 1.02
Cdca3Q99M54 Gm6311-201ENSMUST00000073790 878 ntBASIC21.44■■□□□ 1.02
Cdca3Q99M54 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdca3Q99M54 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdca3Q99M54 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdca3Q99M54 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cdca3Q99M54 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
Cdca3Q99M54 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdca3Q99M54 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdca3Q99M54 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdca3Q99M54 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdca3Q99M54 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cdca3Q99M54 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdca3Q99M54 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms