Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Thumpd1Q99J36 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.96■□□□□ 0.95
Thumpd1Q99J36 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Thumpd1Q99J36 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Thumpd1Q99J36 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Thumpd1Q99J36 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Thumpd1Q99J36 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Thumpd1Q99J36 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Thumpd1Q99J36 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Thumpd1Q99J36 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Thumpd1Q99J36 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Thumpd1Q99J36 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Thumpd1Q99J36 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Thumpd1Q99J36 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Thumpd1Q99J36 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Thumpd1Q99J36 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Thumpd1Q99J36 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Thumpd1Q99J36 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Thumpd1Q99J36 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Thumpd1Q99J36 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Thumpd1Q99J36 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Thumpd1Q99J36 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Thumpd1Q99J36 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Thumpd1Q99J36 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Thumpd1Q99J36 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Thumpd1Q99J36 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Thumpd1Q99J36 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Thumpd1Q99J36 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Thumpd1Q99J36 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Thumpd1Q99J36 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Thumpd1Q99J36 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.89■□□□□ 0.94
Thumpd1Q99J36 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.89■□□□□ 0.94
Thumpd1Q99J36 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Thumpd1Q99J36 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Thumpd1Q99J36 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd1Q99J36 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd1Q99J36 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd1Q99J36 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd1Q99J36 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd1Q99J36 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Thumpd1Q99J36 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.87■□□□□ 0.93
Thumpd1Q99J36 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Thumpd1Q99J36 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Thumpd1Q99J36 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd1Q99J36 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Thumpd1Q99J36 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd1Q99J36 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Thumpd1Q99J36 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Thumpd1Q99J36 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thumpd1Q99J36 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thumpd1Q99J36 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thumpd1Q99J36 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Thumpd1Q99J36 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thumpd1Q99J36 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Thumpd1Q99J36 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Thumpd1Q99J36 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd1Q99J36 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd1Q99J36 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Thumpd1Q99J36 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Thumpd1Q99J36 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.82■□□□□ 0.92
Thumpd1Q99J36 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Thumpd1Q99J36 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Thumpd1Q99J36 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Thumpd1Q99J36 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd1Q99J36 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Thumpd1Q99J36 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Thumpd1Q99J36 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Thumpd1Q99J36 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Thumpd1Q99J36 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Thumpd1Q99J36 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Thumpd1Q99J36 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Thumpd1Q99J36 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.79■□□□□ 0.92
Thumpd1Q99J36 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Thumpd1Q99J36 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Thumpd1Q99J36 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Thumpd1Q99J36 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.77■□□□□ 0.92
Thumpd1Q99J36 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Thumpd1Q99J36 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Thumpd1Q99J36 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Thumpd1Q99J36 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Thumpd1Q99J36 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Thumpd1Q99J36 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Thumpd1Q99J36 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Thumpd1Q99J36 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thumpd1Q99J36 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thumpd1Q99J36 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Thumpd1Q99J36 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Thumpd1Q99J36 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Thumpd1Q99J36 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Thumpd1Q99J36 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Thumpd1Q99J36 Particl-201ENSMUST00000205370 1560 ntBASIC20.72■□□□□ 0.91
Thumpd1Q99J36 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Thumpd1Q99J36 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.71■□□□□ 0.91
Thumpd1Q99J36 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.71■□□□□ 0.91
Thumpd1Q99J36 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Thumpd1Q99J36 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.71■□□□□ 0.91
Thumpd1Q99J36 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Thumpd1Q99J36 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd1Q99J36 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.7■□□□□ 0.9
Thumpd1Q99J36 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms