Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.4■■□□□ 1.5
Pcdhb6Q91XZ4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Pcdhb6Q91XZ4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb6Q91XZ4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb6Q91XZ4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb6Q91XZ4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb6Q91XZ4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb6Q91XZ4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.36■■□□□ 1.49
Pcdhb6Q91XZ4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Pcdhb6Q91XZ4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.36■■□□□ 1.49
Pcdhb6Q91XZ4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Pcdhb6Q91XZ4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Pcdhb6Q91XZ4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb6Q91XZ4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhb6Q91XZ4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.34■■□□□ 1.49
Pcdhb6Q91XZ4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pcdhb6Q91XZ4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb6Q91XZ4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb6Q91XZ4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb6Q91XZ4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.31■■□□□ 1.48
Pcdhb6Q91XZ4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb6Q91XZ4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Pcdhb6Q91XZ4 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.3■■□□□ 1.48
Pcdhb6Q91XZ4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb6Q91XZ4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb6Q91XZ4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb6Q91XZ4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb6Q91XZ4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Pcdhb6Q91XZ4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb6Q91XZ4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Pcdhb6Q91XZ4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
Pcdhb6Q91XZ4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
Pcdhb6Q91XZ4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.27■■□□□ 1.48
Pcdhb6Q91XZ4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.26■■□□□ 1.47
Pcdhb6Q91XZ4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb6Q91XZ4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Pcdhb6Q91XZ4 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.26■■□□□ 1.47
Pcdhb6Q91XZ4 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.26■■□□□ 1.47
Pcdhb6Q91XZ4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb6Q91XZ4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Pcdhb6Q91XZ4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb6Q91XZ4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Pcdhb6Q91XZ4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb6Q91XZ4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.23■■□□□ 1.47
Pcdhb6Q91XZ4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb6Q91XZ4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.22■■□□□ 1.47
Pcdhb6Q91XZ4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Pcdhb6Q91XZ4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhb6Q91XZ4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Pcdhb6Q91XZ4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb6Q91XZ4 Particl-201ENSMUST00000205370 1560 ntBASIC24.21■■□□□ 1.47
Pcdhb6Q91XZ4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb6Q91XZ4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.21■■□□□ 1.47
Pcdhb6Q91XZ4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb6Q91XZ4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
Pcdhb6Q91XZ4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhb6Q91XZ4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhb6Q91XZ4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.19■■□□□ 1.46
Pcdhb6Q91XZ4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.19■■□□□ 1.46
Pcdhb6Q91XZ4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb6Q91XZ4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhb6Q91XZ4 Gm6821-201ENSMUST00000107540 542 ntBASIC24.17■■□□□ 1.46
Pcdhb6Q91XZ4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhb6Q91XZ4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhb6Q91XZ4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Pcdhb6Q91XZ4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.16■■□□□ 1.46
Pcdhb6Q91XZ4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.16■■□□□ 1.46
Pcdhb6Q91XZ4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhb6Q91XZ4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhb6Q91XZ4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhb6Q91XZ4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb6Q91XZ4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb6Q91XZ4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb6Q91XZ4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.15■■□□□ 1.46
Pcdhb6Q91XZ4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pcdhb6Q91XZ4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.14■■□□□ 1.45
Pcdhb6Q91XZ4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhb6Q91XZ4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb6Q91XZ4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb6Q91XZ4 Gm8503-201ENSMUST00000118131 455 ntBASIC24.12■■□□□ 1.45
Pcdhb6Q91XZ4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb6Q91XZ4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb6Q91XZ4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Pcdhb6Q91XZ4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhb6Q91XZ4 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.09■■□□□ 1.45
Pcdhb6Q91XZ4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.09■■□□□ 1.45
Pcdhb6Q91XZ4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhb6Q91XZ4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb6Q91XZ4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb6Q91XZ4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb6Q91XZ4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb6Q91XZ4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb6Q91XZ4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb6Q91XZ4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.05■■□□□ 1.44
Pcdhb6Q91XZ4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Pcdhb6Q91XZ4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb6Q91XZ4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Pcdhb6Q91XZ4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb6Q91XZ4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb6Q91XZ4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms