Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 AC154454.1-201ENSMUST00000225253 216 ntBASIC29.64■■■□□ 2.33
StrcQ8VIM6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
StrcQ8VIM6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
StrcQ8VIM6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
StrcQ8VIM6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
StrcQ8VIM6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
StrcQ8VIM6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
StrcQ8VIM6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
StrcQ8VIM6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
StrcQ8VIM6 Mir3960-201ENSMUST00000198213 73 ntBASIC29.57■■■□□ 2.32
StrcQ8VIM6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
StrcQ8VIM6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29.57■■■□□ 2.32
StrcQ8VIM6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
StrcQ8VIM6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
StrcQ8VIM6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
StrcQ8VIM6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
StrcQ8VIM6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
StrcQ8VIM6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
StrcQ8VIM6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
StrcQ8VIM6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
StrcQ8VIM6 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.52■■■□□ 2.32
StrcQ8VIM6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
StrcQ8VIM6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
StrcQ8VIM6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
StrcQ8VIM6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
StrcQ8VIM6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
StrcQ8VIM6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
StrcQ8VIM6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29.46■■■□□ 2.31
StrcQ8VIM6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
StrcQ8VIM6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
StrcQ8VIM6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC29.45■■■□□ 2.3
StrcQ8VIM6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
StrcQ8VIM6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
StrcQ8VIM6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
StrcQ8VIM6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
StrcQ8VIM6 Gm37136-201ENSMUST00000194368 194 ntBASIC29.43■■■□□ 2.3
StrcQ8VIM6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
StrcQ8VIM6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
StrcQ8VIM6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
StrcQ8VIM6 Gm14523-201ENSMUST00000117260 558 ntBASIC29.41■■■□□ 2.3
StrcQ8VIM6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
StrcQ8VIM6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.4■■■□□ 2.3
StrcQ8VIM6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
StrcQ8VIM6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.4■■■□□ 2.3
StrcQ8VIM6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
StrcQ8VIM6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
StrcQ8VIM6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
StrcQ8VIM6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
StrcQ8VIM6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
StrcQ8VIM6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.38■■■□□ 2.29
StrcQ8VIM6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
StrcQ8VIM6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
StrcQ8VIM6 Gm22567-201ENSMUST00000175542 342 ntBASIC29.38■■■□□ 2.29
StrcQ8VIM6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
StrcQ8VIM6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
StrcQ8VIM6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC29.36■■■□□ 2.29
StrcQ8VIM6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
StrcQ8VIM6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
StrcQ8VIM6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
StrcQ8VIM6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
StrcQ8VIM6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC29.34■■■□□ 2.29
StrcQ8VIM6 Gm5812-201ENSMUST00000061073 957 ntBASIC29.34■■■□□ 2.29
StrcQ8VIM6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
StrcQ8VIM6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC29.31■■■□□ 2.28
StrcQ8VIM6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
StrcQ8VIM6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
StrcQ8VIM6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
StrcQ8VIM6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
StrcQ8VIM6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC29.3■■■□□ 2.28
StrcQ8VIM6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
StrcQ8VIM6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
StrcQ8VIM6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
StrcQ8VIM6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
StrcQ8VIM6 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.28■■■□□ 2.28
StrcQ8VIM6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
StrcQ8VIM6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
StrcQ8VIM6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC29.27■■■□□ 2.28
StrcQ8VIM6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.27■■■□□ 2.28
StrcQ8VIM6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
StrcQ8VIM6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
StrcQ8VIM6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
StrcQ8VIM6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
StrcQ8VIM6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
StrcQ8VIM6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.24■■■□□ 2.27
StrcQ8VIM6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.23■■■□□ 2.27
StrcQ8VIM6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
StrcQ8VIM6 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.23■■■□□ 2.27
StrcQ8VIM6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC29.22■■■□□ 2.27
StrcQ8VIM6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
StrcQ8VIM6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
StrcQ8VIM6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
StrcQ8VIM6 Gm15039-201ENSMUST00000118914 875 ntBASIC29.22■■■□□ 2.27
StrcQ8VIM6 Gm9910-201ENSMUST00000195385 1550 ntBASIC29.22■■■□□ 2.27
StrcQ8VIM6 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.22■■■□□ 2.27
StrcQ8VIM6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
StrcQ8VIM6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
StrcQ8VIM6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
StrcQ8VIM6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC29.2■■■□□ 2.27
StrcQ8VIM6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
StrcQ8VIM6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 223.4 ms