Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Rab40bQ8VHP8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab40bQ8VHP8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.19■□□□□ 0.98
Rab40bQ8VHP8 Gm24804-201ENSMUST00000174982 85 ntBASIC21.19■□□□□ 0.98
Rab40bQ8VHP8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab40bQ8VHP8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab40bQ8VHP8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab40bQ8VHP8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rab40bQ8VHP8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab40bQ8VHP8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab40bQ8VHP8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab40bQ8VHP8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab40bQ8VHP8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab40bQ8VHP8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab40bQ8VHP8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rab40bQ8VHP8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab40bQ8VHP8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.15■□□□□ 0.98
Rab40bQ8VHP8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab40bQ8VHP8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab40bQ8VHP8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab40bQ8VHP8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab40bQ8VHP8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rab40bQ8VHP8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Rab40bQ8VHP8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rab40bQ8VHP8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab40bQ8VHP8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rab40bQ8VHP8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rab40bQ8VHP8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab40bQ8VHP8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab40bQ8VHP8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab40bQ8VHP8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab40bQ8VHP8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab40bQ8VHP8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.1■□□□□ 0.97
Rab40bQ8VHP8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab40bQ8VHP8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab40bQ8VHP8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rab40bQ8VHP8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rab40bQ8VHP8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab40bQ8VHP8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rab40bQ8VHP8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rab40bQ8VHP8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rab40bQ8VHP8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rab40bQ8VHP8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab40bQ8VHP8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab40bQ8VHP8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rab40bQ8VHP8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab40bQ8VHP8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab40bQ8VHP8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.05■□□□□ 0.96
Rab40bQ8VHP8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab40bQ8VHP8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab40bQ8VHP8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab40bQ8VHP8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rab40bQ8VHP8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab40bQ8VHP8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab40bQ8VHP8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab40bQ8VHP8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.02■□□□□ 0.96
Rab40bQ8VHP8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab40bQ8VHP8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rab40bQ8VHP8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab40bQ8VHP8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab40bQ8VHP8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab40bQ8VHP8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab40bQ8VHP8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab40bQ8VHP8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab40bQ8VHP8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab40bQ8VHP8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rab40bQ8VHP8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Rab40bQ8VHP8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab40bQ8VHP8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab40bQ8VHP8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.99■□□□□ 0.95
Rab40bQ8VHP8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab40bQ8VHP8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab40bQ8VHP8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab40bQ8VHP8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rab40bQ8VHP8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab40bQ8VHP8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab40bQ8VHP8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rab40bQ8VHP8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.95■□□□□ 0.94
Rab40bQ8VHP8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab40bQ8VHP8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab40bQ8VHP8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab40bQ8VHP8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab40bQ8VHP8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab40bQ8VHP8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rab40bQ8VHP8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab40bQ8VHP8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab40bQ8VHP8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rab40bQ8VHP8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab40bQ8VHP8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rab40bQ8VHP8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Rab40bQ8VHP8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rab40bQ8VHP8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rab40bQ8VHP8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab40bQ8VHP8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.92■□□□□ 0.94
Rab40bQ8VHP8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab40bQ8VHP8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab40bQ8VHP8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab40bQ8VHP8 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.9■□□□□ 0.94
Rab40bQ8VHP8 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.9■□□□□ 0.94
Rab40bQ8VHP8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms