Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rcc1Q8VE37 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rcc1Q8VE37 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rcc1Q8VE37 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rcc1Q8VE37 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rcc1Q8VE37 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rcc1Q8VE37 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rcc1Q8VE37 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rcc1Q8VE37 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Rcc1Q8VE37 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Rcc1Q8VE37 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rcc1Q8VE37 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Rcc1Q8VE37 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rcc1Q8VE37 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rcc1Q8VE37 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rcc1Q8VE37 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rcc1Q8VE37 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rcc1Q8VE37 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rcc1Q8VE37 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rcc1Q8VE37 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rcc1Q8VE37 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rcc1Q8VE37 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rcc1Q8VE37 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Rcc1Q8VE37 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rcc1Q8VE37 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rcc1Q8VE37 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rcc1Q8VE37 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rcc1Q8VE37 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rcc1Q8VE37 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rcc1Q8VE37 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rcc1Q8VE37 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rcc1Q8VE37 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rcc1Q8VE37 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rcc1Q8VE37 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rcc1Q8VE37 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.08■□□□□ 0.81
Rcc1Q8VE37 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rcc1Q8VE37 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rcc1Q8VE37 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rcc1Q8VE37 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rcc1Q8VE37 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rcc1Q8VE37 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rcc1Q8VE37 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rcc1Q8VE37 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rcc1Q8VE37 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rcc1Q8VE37 Gm30023-201ENSMUST00000197970 889 ntBASIC20.06■□□□□ 0.8
Rcc1Q8VE37 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.06■□□□□ 0.8
Rcc1Q8VE37 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rcc1Q8VE37 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rcc1Q8VE37 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rcc1Q8VE37 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rcc1Q8VE37 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Rcc1Q8VE37 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rcc1Q8VE37 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.04■□□□□ 0.8
Rcc1Q8VE37 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rcc1Q8VE37 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rcc1Q8VE37 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rcc1Q8VE37 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rcc1Q8VE37 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.04■□□□□ 0.8
Rcc1Q8VE37 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rcc1Q8VE37 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rcc1Q8VE37 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rcc1Q8VE37 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rcc1Q8VE37 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rcc1Q8VE37 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rcc1Q8VE37 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rcc1Q8VE37 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rcc1Q8VE37 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rcc1Q8VE37 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Rcc1Q8VE37 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rcc1Q8VE37 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rcc1Q8VE37 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rcc1Q8VE37 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rcc1Q8VE37 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rcc1Q8VE37 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20■□□□□ 0.79
Rcc1Q8VE37 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rcc1Q8VE37 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20■□□□□ 0.79
Rcc1Q8VE37 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rcc1Q8VE37 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rcc1Q8VE37 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rcc1Q8VE37 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rcc1Q8VE37 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rcc1Q8VE37 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rcc1Q8VE37 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rcc1Q8VE37 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rcc1Q8VE37 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.97■□□□□ 0.79
Rcc1Q8VE37 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rcc1Q8VE37 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rcc1Q8VE37 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rcc1Q8VE37 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rcc1Q8VE37 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rcc1Q8VE37 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rcc1Q8VE37 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rcc1Q8VE37 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rcc1Q8VE37 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.95■□□□□ 0.78
Rcc1Q8VE37 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rcc1Q8VE37 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rcc1Q8VE37 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rcc1Q8VE37 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rcc1Q8VE37 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.94■□□□□ 0.78
Rcc1Q8VE37 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms