Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx39aQ8VDW0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.43■■□□□ 1.82
Ddx39aQ8VDW0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.42■■□□□ 1.82
Ddx39aQ8VDW0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx39aQ8VDW0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx39aQ8VDW0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Ddx39aQ8VDW0 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.41■■□□□ 1.82
Ddx39aQ8VDW0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx39aQ8VDW0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Ddx39aQ8VDW0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx39aQ8VDW0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Ddx39aQ8VDW0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ddx39aQ8VDW0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx39aQ8VDW0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.36■■□□□ 1.81
Ddx39aQ8VDW0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Ddx39aQ8VDW0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx39aQ8VDW0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx39aQ8VDW0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.35■■□□□ 1.81
Ddx39aQ8VDW0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
Ddx39aQ8VDW0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx39aQ8VDW0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.34■■□□□ 1.81
Ddx39aQ8VDW0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx39aQ8VDW0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.33■■□□□ 1.81
Ddx39aQ8VDW0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.8
Ddx39aQ8VDW0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx39aQ8VDW0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Ddx39aQ8VDW0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.31■■□□□ 1.8
Ddx39aQ8VDW0 Mir6538-201ENSMUST00000183713 110 ntBASIC26.31■■□□□ 1.8
Ddx39aQ8VDW0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx39aQ8VDW0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx39aQ8VDW0 Amer2-203ENSMUST00000225247 2662 ntBASIC26.3■■□□□ 1.8
Ddx39aQ8VDW0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Ddx39aQ8VDW0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Ddx39aQ8VDW0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ddx39aQ8VDW0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ddx39aQ8VDW0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Ddx39aQ8VDW0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ddx39aQ8VDW0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ddx39aQ8VDW0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ddx39aQ8VDW0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx39aQ8VDW0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx39aQ8VDW0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ddx39aQ8VDW0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx39aQ8VDW0 Gm4799-201ENSMUST00000095396 657 ntBASIC26.24■■□□□ 1.79
Ddx39aQ8VDW0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
Ddx39aQ8VDW0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx39aQ8VDW0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx39aQ8VDW0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.22■■□□□ 1.79
Ddx39aQ8VDW0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx39aQ8VDW0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx39aQ8VDW0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.22■■□□□ 1.79
Ddx39aQ8VDW0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx39aQ8VDW0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ddx39aQ8VDW0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx39aQ8VDW0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Ddx39aQ8VDW0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ddx39aQ8VDW0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx39aQ8VDW0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Ddx39aQ8VDW0 Gm37136-201ENSMUST00000194368 194 ntBASIC26.2■■□□□ 1.78
Ddx39aQ8VDW0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.2■■□□□ 1.78
Ddx39aQ8VDW0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx39aQ8VDW0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.19■■□□□ 1.78
Ddx39aQ8VDW0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx39aQ8VDW0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx39aQ8VDW0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx39aQ8VDW0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Ddx39aQ8VDW0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx39aQ8VDW0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.15■■□□□ 1.78
Ddx39aQ8VDW0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx39aQ8VDW0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.14■■□□□ 1.78
Ddx39aQ8VDW0 Scarna2-201ENSMUST00000157560 414 ntBASIC26.14■■□□□ 1.78
Ddx39aQ8VDW0 Mir3960-201ENSMUST00000198213 73 ntBASIC26.14■■□□□ 1.78
Ddx39aQ8VDW0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
Ddx39aQ8VDW0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx39aQ8VDW0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx39aQ8VDW0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx39aQ8VDW0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx39aQ8VDW0 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.12■■□□□ 1.77
Ddx39aQ8VDW0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx39aQ8VDW0 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.11■■□□□ 1.77
Ddx39aQ8VDW0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx39aQ8VDW0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx39aQ8VDW0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Ddx39aQ8VDW0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx39aQ8VDW0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.1■■□□□ 1.77
Ddx39aQ8VDW0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx39aQ8VDW0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Ddx39aQ8VDW0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx39aQ8VDW0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx39aQ8VDW0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx39aQ8VDW0 Cap2-205ENSMUST00000225824 1634 ntBASIC26.09■■□□□ 1.77
Ddx39aQ8VDW0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.08■■□□□ 1.77
Ddx39aQ8VDW0 Gm45364-201ENSMUST00000210883 159 ntBASIC26.08■■□□□ 1.77
Ddx39aQ8VDW0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Ddx39aQ8VDW0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.07■■□□□ 1.76
Ddx39aQ8VDW0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx39aQ8VDW0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ddx39aQ8VDW0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx39aQ8VDW0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx39aQ8VDW0 Gm9806-201ENSMUST00000051080 552 ntBASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms